Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02952 and RBAM_017610
See
DNA alignment /
Visit
BSNT_02952 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence pep-align/BSNT_02952___yndL.1.9828.seq
# -bsequence pep-align/RBAM_017610___yndL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02952___yndL-RBAM_017610___yndL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02952___yndL-RBAM_017610___yndL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02952___yndL
# 2: RBAM_017610___yndL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity: 140/273 (51.3%)
# Similarity: 186/273 (68.1%)
# Gaps: 21/273 ( 7.7%)
# Score: 703.5
#
#
#=======================================
BSNT_02952___ 1 -------------------MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTI 31
.||:||:|..|.|..|||:.|||..:.||..
RBAM_017610__ 1 MAKRVRRVDCKAAGKEAEQKKPSKVTLFCRSLQRLKHLYCNINIQMPSIT 50
BSNT_02952___ 32 K--IVKLLFIFMVFTPISSIYAEDIYQNFEELKNNEDPSDYGVVTKETGS 79
| |:.|:..|::.....:..|.|||.:|||||.||||.|:.:.|:|...
RBAM_017610__ 51 KKGILVLILPFLLLPFFRADAASDIYGSFEELKLNEDPFDFSISTREHDP 100
BSNT_02952___ 80 PVLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNSVLHITSTHF 129
.||:|||||||||.||||:|.|:::..|:|||||||.|||:.||:||:||
RBAM_017610__ 101 SVLILAIHGGGIEPGTSELASEIAENRSLYLFEGLKPAGNAALHLTSSHF 150
BSNT_02952___ 130 DEPRALKMTGNHEYVISLHGYAEEDQQIEVGGTDRVRAADLVEKLQHAGF 179
|||:|::|...|.:|||||||..:|::|::|||||.||..|.:.|:..|:
RBAM_017610__ 151 DEPKAVQMVKEHSHVISLHGYGSDDKKIKIGGTDRERAELLTDVLKRHGY 200
BSNT_02952___ 180 PAVLLNTDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSR 229
|||||..:..:|||||||:||:|.:|||||||||||||:|||..|:||||
RBAM_017610__ 201 PAVLLGINDKYAGVSPNNLANQSSSGLSIQIEMSTGFRRSLFDTFTLKSR 250
BSNT_02952___ 230 AVTQNERFYKFTEVMFRFLKYSY 252
|.|||..||:||:.:..|:..:|
RBAM_017610__ 251 ASTQNGTFYQFTKTISDFISDNY 273
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.