Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02916 and RBAM_017600

See DNA alignment / Visit BSNT_02916 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_02916___yncF.1.9828.seq
#    -bsequence pep-align/RBAM_017600___yncF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02916___yncF-RBAM_017600___yncF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02916___yncF-RBAM_017600___yncF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02916___yncF
# 2: RBAM_017600___yncF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     126/144 (87.5%)
# Similarity:   138/144 (95.8%)
# Gaps:           0/144 ( 0.0%)
# Score: 682.0
# 
#
#=======================================

BSNT_02916___      1 MTMKIKIKYLDETQTRISKIEQGDWIDLRAAEDVTIKKDEFKLVPLGVAM     50
                     ||::|||||.|:|||||||||||||||||||||:||||.||||:||||||
RBAM_017600__      1 MTLQIKIKYSDDTQTRISKIEQGDWIDLRAAEDITIKKGEFKLIPLGVAM     50

BSNT_02916___     51 ELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALR    100
                     ||||||||||||||||||:||:||||||||||||||||||||||||:|||
RBAM_017600__     51 ELPEGYEAHVVPRSSTYKHFGIIQTNSMGVIDESYKGDNDFWFFPAFALR    100

BSNT_02916___    101 DTEIKKGDRICQFRIMKKMPAVELVEVEHLGNEDRGGLGSTGTK    144
                     ||:|.||:||||||||||||.|||:||:.|||.|||||||||||
RBAM_017600__    101 DTDISKGERICQFRIMKKMPEVELIEVDKLGNNDRGGLGSTGTK    144


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