Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02916 and RBAM_017600

See Amino acid alignment / Visit BSNT_02916 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence dna-align/BSNT_02916___yncF.1.9828.seq
#    -bsequence dna-align/RBAM_017600___yncF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02916___yncF-RBAM_017600___yncF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02916___yncF-RBAM_017600___yncF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02916___yncF
# 2: RBAM_017600___yncF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity:     342/435 (78.6%)
# Similarity:   342/435 (78.6%)
# Gaps:           0/435 ( 0.0%)
# Score: 1338.0
# 
#
#=======================================

BSNT_02916___      1 ATGACAATGAAAATTAAAATCAAGTATCTAGATGAAACACAAACAAGAAT     50
                     |||||..|..||||.|||||.||.|||..||||||.||.|||||.|||||
RBAM_017600__      1 ATGACTTTACAAATCAAAATTAAATATTCAGATGATACGCAAACGAGAAT     50

BSNT_02916___     51 CAGCAAAATTGAGCAGGGAGACTGGATTGATCTTCGGGCAGCTGAAGATG    100
                     |||.||||||||.|||||.||.|||||||||||.|||||||||||||||.
RBAM_017600__     51 CAGTAAAATTGAACAGGGCGATTGGATTGATCTGCGGGCAGCTGAAGATA    100

BSNT_02916___    101 TAACAATCAAAAAAGATGAATTTAAGCTTGTCCCATTAGGTGTTGCAATG    150
                     |||||||||||||||.||||||.||.|||.||||..|.||.|||||.|||
RBAM_017600__    101 TAACAATCAAAAAAGGTGAATTCAAACTTATCCCGCTTGGAGTTGCGATG    150

BSNT_02916___    151 GAACTGCCTGAAGGTTACGAAGCACATGTCGTCCCTCGTTCAAGTACATA    200
                     ||||||||.|||||.||.||.||.||||||||.||.||||||||||||||
RBAM_017600__    151 GAACTGCCGGAAGGATATGAGGCCCATGTCGTTCCGCGTTCAAGTACATA    200

BSNT_02916___    201 TAAGAACTTTGGCGTTATTCAAACAAATTCAATGGGTGTTATCGATGAGT    250
                     ||||.|.||.||..|.|||||.||||||||||||||.||.||.|||||.|
RBAM_017600__    201 TAAGCATTTCGGTATCATTCAGACAAATTCAATGGGAGTCATTGATGAAT    250

BSNT_02916___    251 CATATAAGGGAGACAACGATTTCTGGTTCTTTCCTGCTTATGCATTGCGT    300
                     |.|||||.||.|||||.||.||||||||.||||||||.|..||..|.||.
RBAM_017600__    251 CTTATAAAGGCGACAATGACTTCTGGTTTTTTCCTGCATTCGCGCTTCGG    300

BSNT_02916___    301 GATACTGAAATTAAGAAGGGTGATCGTATCTGCCAGTTTAGAATCATGAA    350
                     |||||.||.|||...|||||.||.||.||||||||.||.|||||||||||
RBAM_017600__    301 GATACCGACATTTCCAAGGGGGAGCGGATCTGCCAATTCAGAATCATGAA    350

BSNT_02916___    351 GAAAATGCCGGCGGTTGAATTGGTTGAAGTCGAGCATTTGGGAAACGAGG    400
                     |||||||||.|..||.||..||.|.|||||.||..|..|.||.|||.|.|
RBAM_017600__    351 GAAAATGCCTGAAGTGGAGCTGATCGAAGTAGACAAGCTCGGGAACAATG    400

BSNT_02916___    401 ATAGAGGAGGACTCGGTTCAACAGGTACGAAGTAA    435
                     |..|.||.|||||.||.||||||||.|||||.|||
RBAM_017600__    401 ACCGCGGCGGACTGGGATCAACAGGCACGAAATAA    435


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