Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02893 and RBAM_017520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_02893.1.9828.seq
# -bsequence pep-align/RBAM_017520___ynaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02893-RBAM_017520___ynaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02893-RBAM_017520___ynaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02893
# 2: RBAM_017520___ynaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 107/213 (50.2%)
# Similarity: 132/213 (62.0%)
# Gaps: 51/213 (23.9%)
# Score: 568.5
#
#
#=======================================
BSNT_02893 1 --------------------------------------------MNLKRF 6
:||:.|
RBAM_017520__ 1 MKINDYLKERFPTLKLVPGIYHQWHVGIHFSLGGNMYQFNESGALNLEYF 50
BSNT_02893 7 RFVYEQISTIFNQLFEQNDDIFLVTNMYKHKTNDKFIKKLKVYQPFLKCK 56
:.|:.|.:.:||:|||.:||:|||.|:|||||.....:||||||||||||
RBAM_017520__ 51 QLVHHQTAALFNELFEHSDDLFLVANVYKHKTQGNHARKLKVYQPFLKCK 100
BSNT_02893 57 NYLNQIQVKTYSYPFEIDEAEEYEMQQFSLLCKPRDLHVAELLKAASNED 106
:.|.:|||||...|.| |||||||||||||.:||.:.:|||||.:||
RBAM_017520__ 101 DDLYRIQVKTCPCPVE----EEYEMQQFSLLCKRKDLRIPQLLKAAVHED 146
BSNT_02893 107 FPLKPRFGGYSIDYPDVFFVNITKDIIFFIYDDRGCEVIALDFKRIRPLN 156
|||||||||.|:.|||||||::|||||||:||||||||||||..|||.|.
RBAM_017520__ 147 FPLKPRFGGCSVGYPDVFFVDMTKDIIFFLYDDRGCEVIALDAGRIRKLY 196
BSNT_02893 157 EKYHNWVEEYKYI 169
::||:|:|..
RBAM_017520__ 197 DQYHDWIELD--- 206
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