Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02914 and RBAM_017400

See DNA alignment / Visit BSNT_02914 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_02914.1.9828.seq
#    -bsequence pep-align/RBAM_017400.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02914-RBAM_017400.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02914-RBAM_017400.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02914
# 2: RBAM_017400
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      43/143 (30.1%)
# Similarity:    68/143 (47.6%)
# Gaps:           5/143 ( 3.5%)
# Score: 151.0
# 
#
#=======================================

BSNT_02914         1 MFKKIVVGSILVSSITGLSSTYASAASIDHTPK--KVTAFAAQSDIILEE     48
                     |.|||:.|::....|..:.:...||..:.:..|  |...::..:..|..:
RBAM_017400        1 MKKKIIAGALAFGLIPLMGTADVSAKPLPNQDKIMKPAGWSCDAPYIACQ     50

BSNT_02914        49 EETFRGDGKFYFDYYGSEDGEIRVFVENTGSNPFEFKIVKPGGGTIASGY     98
                     ..: .|.||..|:|.||..|:|||||.|.||..|:|.|..|.|.|:.|..
RBAM_017400       51 PFS-GGTGKVSFNYQGSSPGKIRVFVANDGSKSFKFTINYPNGNTLLSST     99

BSNT_02914        99 TVKPGKSVTLTLDVSHYKTGTYYIRCQNDDGAKIKAFAKVRAL    141
                     |:..||  |...:.|..:.|.|.::..:..|..:..|.:...:
RBAM_017400      100 TLNAGK--TFIQEFSVNQKGEYILKYDSGTGDSVDGFFRSVEI    140


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