Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02903 and RBAM_017340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_02903___xylR.1.9828.seq
# -bsequence pep-align/RBAM_017340___xylR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02903___xylR-RBAM_017340___xylR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02903___xylR-RBAM_017340___xylR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02903___xylR
# 2: RBAM_017340___xylR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 345/384 (89.8%)
# Similarity: 364/384 (94.8%)
# Gaps: 0/384 ( 0.0%)
# Score: 1792.0
#
#
#=======================================
BSNT_02903___ 1 MDIADQTFVKKVNQKLLLKEILKNSPISRAKLSEMTGLNKSTVSSQVNTL 50
||||||.|||||||||||.|||||||||||||||||||||||||||||||
RBAM_017340__ 1 MDIADQAFVKKVNQKLLLNEILKNSPISRAKLSEMTGLNKSTVSSQVNTL 50
BSNT_02903___ 51 MKENLVFEIGQGKSSGGRRPVMLVFNKKAGYSVGIDVGVDYINGILTDLE 100
||||||||||||:||||||||||||||||||||||||||||:||||||||
RBAM_017340__ 51 MKENLVFEIGQGQSSGGRRPVMLVFNKKAGYSVGIDVGVDYVNGILTDLE 100
BSNT_02903___ 101 GTIVLDQYCHLESNSPEITKDILIDMIHHFITHMPQSPYGLIGIGICVPG 150
|||||||:.|||.|||||||||||:||||||..||||||||||||||.||
RBAM_017340__ 101 GTIVLDQHHHLECNSPEITKDILIEMIHHFIAKMPQSPYGLIGIGICAPG 150
BSNT_02903___ 151 LIDKDQKIVFTPNSNWRDIDLKSSIQEKYNVPVFIENEANAGAYGEKVFG 200
||||:|||||.||:|||||||||.||:|:|||||||||||||||||||||
RBAM_017340__ 151 LIDKNQKIVFAPNANWRDIDLKSFIQKKFNVPVFIENEANAGAYGEKVFG 200
BSNT_02903___ 201 AAKNHDNIIYVSISTGIGIGVIINNHLYRGVSGFSGEMGHMTIDFNGPKC 250
||||||||||.||.|||||||:|||||||||.|||||||||||||.||||
RBAM_017340__ 201 AAKNHDNIIYASIGTGIGIGVMINNHLYRGVGGFSGEMGHMTIDFKGPKC 250
BSNT_02903___ 251 SCGNRGCWELYASEKALLTSLQTKAKKLSYQDIIDLAHLNDIGTLNALQN 300
|||||||||||||||||:||||||.||:|.|||||||||||:|||.||||
RBAM_017340__ 251 SCGNRGCWELYASEKALVTSLQTKEKKVSSQDIIDLAHLNDVGTLQALQN 300
BSNT_02903___ 301 FGFYLGIGLTNILNTFNPQAVILRNSIIESHPMVLNSMRSEVSSRVYSQL 350
||||||||||||||||||||:||||||||||||||:|::|||||||||||
RBAM_017340__ 301 FGFYLGIGLTNILNTFNPQAIILRNSIIESHPMVLHSIKSEVSSRVYSQL 350
BSNT_02903___ 351 GNSYELLPSSLGQNAPALGMSSIVIDHFLDMITM 384
.:|||||||.||:||||||||||||||||||:..
RBAM_017340__ 351 DSSYELLPSILGKNAPALGMSSIVIDHFLDMVHN 384
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