Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02821 and RBAM_017280

See DNA alignment / Visit BSNT_02821 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_02821.1.9828.seq
#    -bsequence pep-align/RBAM_017280.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02821-RBAM_017280.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02821-RBAM_017280.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02821
# 2: RBAM_017280
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:      73/138 (52.9%)
# Similarity:    73/138 (52.9%)
# Gaps:          59/138 (42.8%)
# Score: 347.5
# 
#
#=======================================

BSNT_02821         1 MTEQLSFLHPVDLKAVRKIVIKELKDYRALKVQLENKKESVDAGISPFPS     50
                                                         .|||||||||||||
RBAM_017280        1 ------------------------------------MKESVDAGISPFPS     14

BSNT_02821        51 IRDSFILNELKVKQMERALENSLDDEERMIIEKKYLTASQTKDIHIYMEL    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_017280       15 IRDSFILNELKVKQMERALENSLDDEERMIIEKKYLAASQTKDIHIYMEL     64

BSNT_02821       101 GMKKDTYYEIKHRAILRIATALGII-------------    125
                     |||||||||          ||....             
RBAM_017280       65 GMKKDTYYE----------TACHFTHCYSTRNNLSAFL     92


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