Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02821 and RBAM_017280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_02821.1.9828.seq
# -bsequence dna-align/RBAM_017280.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02821-RBAM_017280.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02821-RBAM_017280.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02821
# 2: RBAM_017280
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 252/392 (64.3%)
# Similarity: 252/392 (64.3%)
# Gaps: 127/392 (32.4%)
# Score: 1182.5
#
#
#=======================================
BSNT_02821 1 GTGACAGAACAACTTTCATTCCTTCATCCTGTGGATTTGAAGGCAGTCCG 50
RBAM_017280 0 -------------------------------------------------- 0
BSNT_02821 51 AAAAATTGTGATCAAAGAACTCAAAGATTATCGAGCTTTGAAAGTACAGC 100
RBAM_017280 0 -------------------------------------------------- 0
BSNT_02821 101 TTGAGAATAAAAAGGAATCGGTTGACGCTGGCATCAGCCCGTTTCCTTCT 150
||| ||||||||||||||||||||.|||||||||||||||||.
RBAM_017280 1 TTG--------AAGGAATCGGTTGACGCTGGTATCAGCCCGTTTCCTTCA 42
BSNT_02821 151 ATCAGAGATTCTTTCATATTAAATGAACTGAAGGTCAAACAGATGGAAAG 200
|||||||||||||||||||||||||||||||||||.||.|||||||||||
RBAM_017280 43 ATCAGAGATTCTTTCATATTAAATGAACTGAAGGTTAAGCAGATGGAAAG 92
BSNT_02821 201 GGCGTTAGAAAACAGCCTGGACGATGAAGAACGGATGATCATTGAGAAAA 250
|||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_017280 93 GGCGTTAGAAAACAGCCTGGACGATGAAGAACGCATGATCATTGAGAAAA 142
BSNT_02821 251 AATACTTAACAGCCAGCCAAACAAAAGACATTCATATCTATATGGAACTT 300
||||||||.|||||||||||||.||||||||||||||.|||||||||||.
RBAM_017280 143 AATACTTAGCAGCCAGCCAAACGAAAGACATTCATATTTATATGGAACTC 192
BSNT_02821 301 GGCATGAAAAAGGACACCTATTATGAAATAAAACATCGTGCCATTTTGCG 350
||||||||.|||||||||||||||| |||||.|||||||||||.||
RBAM_017280 193 GGCATGAAGAAGGACACCTATTATG-----AAACAGCGTGCCATTTTACG 237
BSNT_02821 351 CATTGCTACAGCACTCGGAATTATCTGA-------------- 378
|||||||||||||||||||||.||||||
RBAM_017280 238 CATTGCTACAGCACTCGGAATAATCTGAGTGCTTTTTTGTAG 279
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