Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02801 and RBAM_017250

See DNA alignment / Visit BSNT_02801 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_02801___glnR.1.9828.seq
#    -bsequence pep-align/RBAM_017250___glnR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02801___glnR-RBAM_017250___glnR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02801___glnR-RBAM_017250___glnR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02801___glnR
# 2: RBAM_017250___glnR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:     126/135 (93.3%)
# Similarity:   131/135 (97.0%)
# Gaps:           1/135 ( 0.7%)
# Score: 635.0
# 
#
#=======================================

BSNT_02801___      1 MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARSEGNRRLFS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017250__      1 MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARSEGNRRLFS     50

BSNT_02801___     51 FHDVDKLLEIKHLIEQGVNMAGIKQILAKAEAEPEQKQNEKTKKPMKHDL    100
                     |||||||||||:|||||||||||||||.||.||||:| :|||.|||||:|
RBAM_017250__     51 FHDVDKLLEIKNLIEQGVNMAGIKQILDKASAEPEEK-SEKTAKPMKHNL     99

BSNT_02801___    101 SDDELRQLLKNELMQAGRFQRGNTFRQGDMSRFFH    135
                     ||||||:||||||||||||||||||||||||||||
RBAM_017250__    100 SDDELRKLLKNELMQAGRFQRGNTFRQGDMSRFFH    134


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