Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02800 and RBAM_017240

See DNA alignment / Visit BSNT_02800 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_02800___ynbB.1.9828.seq
#    -bsequence pep-align/RBAM_017240___ynbB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02800___ynbB-RBAM_017240___ynbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02800___ynbB-RBAM_017240___ynbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02800___ynbB
# 2: RBAM_017240___ynbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity:     374/421 (88.8%)
# Similarity:   401/421 (95.2%)
# Gaps:           0/421 ( 0.0%)
# Score: 1983.0
# 
#
#=======================================

BSNT_02800___      1 MFDTLTHGELLKKTAMEVEADIAGIHKQIEEISERNEWRVLQSYRKHKVS     50
                     ||||||||.||:|||.|.||:|:.:||:||||||||||||||||||||||
RBAM_017240__      1 MFDTLTHGALLQKTAEETEAEISAVHKRIEEISERNEWRVLQSYRKHKVS     50

BSNT_02800___     51 DTHFMPSTGYGYDDIGRDTLESIYADVFGGEAGLVRPQIISGTHAISIAL    100
                     ||||.||||||||||||||||.||||||||||||||||||||||||||||
RBAM_017240__     51 DTHFTPSTGYGYDDIGRDTLEKIYADVFGGEAGLVRPQIISGTHAISIAL    100

BSNT_02800___    101 FGVLRPGDELLYITGKPYDTLEEIVGVRGGENAGSLKDFQIGYNAVDLTK    150
                     |||||||||||||||||||||||||||||||.:||||:|||||||||||.
RBAM_017240__    101 FGVLRPGDELLYITGKPYDTLEEIVGVRGGEYSGSLKEFQIGYNAVDLTS    150

BSNT_02800___    151 DGKIDYDAVAAAINPKTKVIGIQRSKGYANRPSFLISEIKEMIRFVKEVN    200
                     :|::|::||.|||.|.||||||||||||||||||.|:||:||||||||:.
RBAM_017240__    151 EGRVDFEAVRAAIQPNTKVIGIQRSKGYANRPSFRINEIEEMIRFVKEIK    200

BSNT_02800___    201 ENLIVFVDNCYGEFVEELEPCHVGADLMAGSLIKNPGGGLAKTGGYLVGK    250
                     |::|||||||||||.||.||||||||||||||||||||||||||||||||
RBAM_017240__    201 EDVIVFVDNCYGEFAEEREPCHVGADLMAGSLIKNPGGGLAKTGGYLVGK    250

BSNT_02800___    251 AKWIEACSYRMTSPGIGREAGASLYSLQEMYQGFFLAPHVVSQSLKGAVF    300
                     |||||||||||||||||.|||||||||||||||||||||||:||||||||
RBAM_017240__    251 AKWIEACSYRMTSPGIGSEAGASLYSLQEMYQGFFLAPHVVAQSLKGAVF    300

BSNT_02800___    301 TARFLEKLGFTSNPKWDAKRTDLIQSVEFSDREKMIAFCQAIQFASPINA    350
                     ||||||||||||||.|:|.||||||||||.|.:||||||||||:||||||
RBAM_017240__    301 TARFLEKLGFTSNPAWNAPRTDLIQSVEFQDPDKMIAFCQAIQYASPINA    350

BSNT_02800___    351 HVTPYPAYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLT    400
                     ||||||:||||||||||||||||:||||||||||||||||||||||||||
RBAM_017240__    351 HVTPYPSYMPGYEDDVIMAAGTFVQGASIELSADGPIRPPYVAYVQGGLT    400

BSNT_02800___    401 YSHVKNAICSAVDSLMEKQLI    421
                     |:||||||||||::||||:||
RBAM_017240__    401 YAHVKNAICSAVNALMEKELI    421


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