Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02798 and RBAM_017220

See DNA alignment / Visit BSNT_02798 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_02798___spoVK.1.9828.seq
#    -bsequence pep-align/RBAM_017220___spoVK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02798___spoVK-RBAM_017220___spoVK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02798___spoVK-RBAM_017220___spoVK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02798___spoVK
# 2: RBAM_017220___spoVK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     308/321 (96.0%)
# Similarity:   313/321 (97.5%)
# Gaps:           0/321 ( 0.0%)
# Score: 1554.0
# 
#
#=======================================

BSNT_02798___      1 MERAVTYKNNGQINIILNGQKQVLTNAEAEAEYQAALQKNEAKHGILKEI     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_017220__      1 MERAVTYKNNGQINIILNGQKQVLTNAEAEAEYQAALQKNEAKHSILKEI     50

BSNT_02798___     51 EKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVGKQALHMMFKGNP    100
                     ||||:.||||||||||||||||||||||||||||||||||||||||||||
RBAM_017220__     51 EKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVGKQALHMMFKGNP    100

BSNT_02798___    101 GTGKTTVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017220__    101 GTGKTTVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLI    150

BSNT_02798___    151 KKSLGGILFIDEAYSLARGGEKDFGKEAIDTLVKHMEDKQHEFILILAGY    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017220__    151 KKSLGGILFIDEAYSLARGGEKDFGKEAIDTLVKHMEDKQHEFILILAGY    200

BSNT_02798___    201 SREMDHFLSLNPGLQSRFPISIDFPDYSVTQLMEIAKRMIDEREYQLSQE    250
                     ||||.||||||||||||||||||||||||||||:||||||.|||||||||
RBAM_017220__    201 SREMTHFLSLNPGLQSRFPISIDFPDYSVTQLMDIAKRMIAEREYQLSQE    250

BSNT_02798___    251 AEWKLKDYLMTVKSTTSPIKFSNGRFVRNVIEKSIRAQAMRLLMGDQYLK    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017220__    251 AEWKLKDYLMTVKSTTSPIKFSNGRFVRNVIEKSIRAQAMRLLMGDQYLK    300

BSNT_02798___    301 SDLMTIKSQDLSIKEEASGSA    321
                     :||||||||||.||:||:...
RBAM_017220__    301 NDLMTIKSQDLLIKDEAAAHE    321


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