Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02797 and RBAM_017210

See DNA alignment / Visit BSNT_02797 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_02797___cwlC.1.9828.seq
#    -bsequence pep-align/RBAM_017210___cwlC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02797___cwlC-RBAM_017210___cwlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02797___cwlC-RBAM_017210___cwlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02797___cwlC
# 2: RBAM_017210___cwlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     194/255 (76.1%)
# Similarity:   228/255 (89.4%)
# Gaps:           3/255 ( 1.2%)
# Score: 1008.5
# 
#
#=======================================

BSNT_02797___      1 MVKIFIDPGHGGSDPGATGNGLQEKTLTLQIALALRTILTNEYEGVSLLL     50
                     ||||||||||||:|.||||||||||.:||:|||||||||||||||||:.:
RBAM_017210__      1 MVKIFIDPGHGGTDSGATGNGLQEKAVTLEIALALRTILTNEYEGVSVTM     50

BSNT_02797___     51 SRTSDQYVSLNDRTNAANNWGADFFLSIHVNSGGGTGFESYIYPDVGAPT    100
                     |||||:.|||.:||:|||:||||:|||||:||||||||||||||.|||||
RBAM_017210__     51 SRTSDKTVSLTERTDAANSWGADYFLSIHINSGGGTGFESYIYPGVGAPT    100

BSNT_02797___    101 TTYQSTIHSEVIQAVDFADRGKKTANFHVLRESAMPALLTENGFIDTVSD    150
                     :||||.:|::||||..|.||||||||||||||::|||:||||||:||.:|
RBAM_017210__    101 STYQSAVHTQVIQASGFNDRGKKTANFHVLRETSMPAILTENGFVDTSAD    150

BSNT_02797___    151 ANKLKTSSFIQSLARGHANGLEQAFNLKKTSSLGLYKVQIGAFKVKANAD    200
                     ||||||:|||:|||||||.||||||.|||.:.  ||||||||||||||||
RBAM_017210__    151 ANKLKTASFIESLARGHAKGLEQAFGLKKKAD--LYKVQIGAFKVKANAD    198

BSNT_02797___    201 SLASKAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAVRAKNAGFDAI    250
                     :||:.||:||||:|||.|.||:|||||||||:|.|:.||.||:.|||||.
RBAM_017210__    199 ALAADAESKGFDAIVLPKGGLFKVQIGAFSSRDYAEALAARAEKAGFDAF    248

BSNT_02797___    251 VILES    255
                     ::.: 
RBAM_017210__    249 IMQD-    252


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