Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02796 and RBAM_017200
See
DNA alignment /
Visit
BSNT_02796 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence pep-align/BSNT_02796___ymaB.1.9828.seq
# -bsequence pep-align/RBAM_017200___ymaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02796___ymaB-RBAM_017200___ymaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02796___ymaB-RBAM_017200___ymaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02796___ymaB
# 2: RBAM_017200___ymaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 164/206 (79.6%)
# Similarity: 182/206 (88.3%)
# Gaps: 0/206 ( 0.0%)
# Score: 847.0
#
#
#=======================================
BSNT_02796___ 1 MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRR 50
|.||||:||.|||.|||:.|.||||||.|||.|:..|||||||.:.|:||
RBAM_017200__ 1 MNKMDEIILAAPRSDVFQNEMLTFQGVNSEDERIVNIMAQIEAHFFEIRR 50
BSNT_02796___ 51 GDAEEDPRFKQPIPYVVIKREDEVFLYERLAGGGESRLHNKLSLGFGGHM 100
||||||||||||||||||:|:||||:||||||||||||||||||||||||
RBAM_017200__ 51 GDAEEDPRFKQPIPYVVIRRDDEVFVYERLAGGGESRLHNKLSLGFGGHM 100
BSNT_02796___ 101 NAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGK 150
|.:||||||:||||.||||||.|||.|.|||||.||||||||||||.|||
RBAM_017200__ 101 NPMEGAASFSEVLKQNTDRELAEELYIREEDKQNIVTLGLINDDENDVGK 150
BSNT_02796___ 151 VHIGILSALQLKPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQF 200
|||||||||||...||||||||:||||:|||:||||::::|.|||.||||
RBAM_017200__ 151 VHIGILSALQLASAAQVEVKEKDQIAGRWMKLSELKEENVYQRLEAWSQF 200
BSNT_02796___ 201 VVDILE 206
|.|||:
RBAM_017200__ 201 VADILQ 206
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.