Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02795 and RBAM_017190

See DNA alignment / Visit BSNT_02795 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_02795___nrdF.1.9828.seq
#    -bsequence pep-align/RBAM_017190___nrdF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02795___nrdF-RBAM_017190___nrdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02795___nrdF-RBAM_017190___nrdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02795___nrdF
# 2: RBAM_017190___nrdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     322/329 (97.9%)
# Similarity:   327/329 (99.4%)
# Gaps:           0/329 ( 0.0%)
# Score: 1697.0
# 
#
#=======================================

BSNT_02795___      1 MTKIYDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKN     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__      1 MTKIYDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKN     50

BSNT_02795___     51 EQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAV    100
                     |||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_017190__     51 EQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVEGHQRKAVLNFMAMMENAV    100

BSNT_02795___    101 HAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQMIVGLYKAIQKDDE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    101 HAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQMIVGLYKAIQKDDE    150

BSNT_02795___    151 ISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    151 ISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAI    200

BSNT_02795___    201 HGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYDQV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    201 HGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYDQV    250

BSNT_02795___    251 GLSHDVKKFIRYNANKALMNLGFDPYFEEEDINPIVLNGLNTKTKSHDFF    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    251 GLSHDVKKFIRYNANKALMNLGFDPYFEEEDINPIVLNGLNTKTKSHDFF    300

BSNT_02795___    301 SMKGNGYKKATVEPLKDDDFYFEDEKEQI    329
                     ||||||||||||||:||:||||..::|||
RBAM_017190__    301 SMKGNGYKKATVEPIKDEDFYFGQDEEQI    329


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