Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02795 and RBAM_017190

See Amino acid alignment / Visit BSNT_02795 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence dna-align/BSNT_02795___nrdF.1.9828.seq
#    -bsequence dna-align/RBAM_017190___nrdF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02795___nrdF-RBAM_017190___nrdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02795___nrdF-RBAM_017190___nrdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02795___nrdF
# 2: RBAM_017190___nrdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity:     904/994 (90.9%)
# Similarity:   904/994 (90.9%)
# Gaps:           8/994 ( 0.8%)
# Score: 4150.0
# 
#
#=======================================

BSNT_02795___      1 GTGACAAAAATTTATGACGCAGCAAACTGGTCAAAGCATGAAGACGATTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_017190__      1 GTGACAAAAATTTATGACGCAGCAAACTGGTCAAAGCATGAAGATGATTT     50

BSNT_02795___     51 TACCCAAATGTTCTATAACCAAAACGTGAAACAGTTCTGGCTTCCGGAAG    100
                     .|||||||||||.||.|||||||||||.||.|||||.|||||||||||||
RBAM_017190__     51 CACCCAAATGTTTTACAACCAAAACGTAAAGCAGTTTTGGCTTCCGGAAG    100

BSNT_02795___    101 AGATTGCTTTAAACGGCGATCTCCTCACATGGAAGTACCTCGGAAAAAAT    150
                     ||||.||.||||||||||||||.||.||.||||||||..|.||.||||||
RBAM_017190__    101 AGATCGCATTAAACGGCGATCTTCTTACTTGGAAGTATTTGGGTAAAAAT    150

BSNT_02795___    151 GAGCAGGACACTTATATGAAGGTACTGGCCGGACTTACGCTTCTTGATAC    200
                     ||||||||.||.||.||||||||.||.|||||.||.||.||.||||||||
RBAM_017190__    151 GAGCAGGATACGTACATGAAGGTGCTCGCCGGCCTGACACTGCTTGATAC    200

BSNT_02795___    201 AGAGCAGGGGAATACGGGGATGCCGATCGTGGCTGAACACGTAGACGGCC    250
                     ||||||||||||.|||||.||||||||.|||||.||.|||||.||.||.|
RBAM_017190__    201 AGAGCAGGGGAACACGGGCATGCCGATTGTGGCCGAGCACGTCGAAGGTC    250

BSNT_02795___    251 ACCAGCGGAAAGCGGTGCTGAACTTTATGGCGATGATGGAGAACGCTGTC    300
                     |.|||||.||||||||.||.||.||.||||||||||||||.|||||.||.
RBAM_017190__    251 ATCAGCGAAAAGCGGTTCTTAATTTCATGGCGATGATGGAAAACGCGGTG    300

BSNT_02795___    301 CATGCGAAGTCGTACTCTAATATTTTCATGACCCTTGCACCGACTGAAAC    350
                     ||.||.||.||.||.||.||||||||.|||||.|||||.|||||||||||
RBAM_017190__    301 CACGCAAAATCATATTCAAATATTTTTATGACGCTTGCTCCGACTGAAAC    350

BSNT_02795___    351 GATCAATGAAGTATTTGAATGGGTTAAACAAAATAAATATTTGCAGAAAA    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    351 GATTAATGAAGTATTTGAATGGGTTAAACAAAATAAATATTTGCAGAAAA    400

BSNT_02795___    401 AAGCGCAAATGATTGTCGGGCTTTACAAAGCCATTCAAAAAGATGATGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    401 AAGCGCAAATGATTGTCGGGCTTTACAAAGCCATTCAAAAAGATGATGAA    450

BSNT_02795___    451 ATTTCACTGTTCAAAGCCATGGTTGCTTCCGTCTATCTGGAAAGCTTCCT    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_017190__    451 ATTTCACTGTTCAAAGCGATGGTTGCTTCCGTCTATCTGGAAAGCTTCCT    500

BSNT_02795___    501 TTTCTACAGCGGTTTCTATTATCCGTTATATTTCTACGGACAAGGAAAAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    501 TTTCTACAGCGGTTTCTATTATCCGTTATATTTCTACGGACAAGGAAAAC    550

BSNT_02795___    551 TGATGCAAAGCGGTGAGATCATTAACCTGATCCTTCGTGACGAAGCGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    551 TGATGCAAAGCGGTGAGATCATTAACCTGATCCTTCGTGACGAAGCGATT    600

BSNT_02795___    601 CACGGCGTGTATGTCGGTCTCCTTGCTCAGGAAATTTATAATAAACAGAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    601 CACGGCGTGTATGTCGGTCTCCTTGCTCAGGAAATTTATAATAAACAGAC    650

BSNT_02795___    651 AGAAGAGAAAAAAGCAGAGCTTCGTGAATTTGCGATTGACCTTCTGAATC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017190__    651 AGAAGAGAAAAAAGCAGAGCTTCGTGAATTTGCGATTGACCTTCTGAATC    700

BSNT_02795___    701 AGTTATATGAAAATGAGCTTGAGTATACAGAGGACTTGTACGATCAAGTC    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
RBAM_017190__    701 AGTTATATGAAAATGAGCTTGAATATACAGAGGACTTGTACGATCAAGTC    750

BSNT_02795___    751 GGACTCTCACACGATGTAAAGAAATTCATCCGCTATAATGCGAATAAAGC    800
                     ||||||||||||||||||||||||||||||||||||||.||.||||||||
RBAM_017190__    751 GGACTCTCACACGATGTAAAGAAATTCATCCGCTATAACGCCAATAAAGC    800

BSNT_02795___    801 GCTGATGAATCTT-GGATTTGATCCATACTTCGAAGAGGAAGATATTAAT    849
                     ..||||||| ||| ||.||.|||||.|||||.|||||.||.|||||||||
RBAM_017190__    801 TTTGATGAA-CTTAGGGTTCGATCCTTACTTTGAAGAAGAGGATATTAAT    849

BSNT_02795___    850 CCGATCGTATTAAACGGATTAAACACAAAAACAAAATCGCATGACTTCTT    899
                     ||||||||||||||||||||||||||.|||||||||||.|||||.|||||
RBAM_017190__    850 CCGATCGTATTAAACGGATTAAACACCAAAACAAAATCACATGATTTCTT    899

BSNT_02795___    900 CTCTATGAAGGGGAATGGTTATAAAAAAGCGACAGTTGAGCCGCTCAAAG    949
                     |||.|||||.|||||.||.||.|||||.|||||.||.||.|||.|.||.|
RBAM_017190__    900 CTCCATGAAAGGGAACGGCTACAAAAAGGCGACGGTAGAACCGATTAAGG    949

BSNT_02795___    950 ATGATGACTTTTATTTTG---AAGATGAAAAAGAGCAGATATAA    990
                     |.||.||.||||||||||   ||||||   ||||||||||||||
RBAM_017190__    950 ACGAAGATTTTTATTTTGGCCAAGATG---AAGAGCAGATATAA    990


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