Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02791 and RBAM_017160

See DNA alignment / Visit BSNT_02791 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02791___ymzA.1.9828.seq
#    -bsequence pep-align/RBAM_017160___ymzA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02791___ymzA-RBAM_017160___ymzA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02791___ymzA-RBAM_017160___ymzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02791___ymzA
# 2: RBAM_017160___ymzA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      62/76 (81.6%)
# Similarity:    67/76 (88.2%)
# Gaps:           5/76 ( 6.6%)
# Score: 324.0
# 
#
#=======================================

BSNT_02791___      1 MKHKVIVNHWEEICEDDSCYEYGTSIIVNGKELIREASIITALKAVLEEI     50
                     ||||||:|||||.|||||||||||||||:||||||||||.:||||||:||
RBAM_017160__      1 MKHKVIINHWEETCEDDSCYEYGTSIIVDGKELIREASITSALKAVLKEI     50

BSNT_02791___     51 GADVEIEETVESEKCCDSLRKKNLDY     76
                     ||||||||||||||.|||.:|     
RBAM_017160__     51 GADVEIEETVESEKKCDSYKK-----     71


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.