Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02791 and RBAM_017160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_02791___ymzA.1.9828.seq
# -bsequence dna-align/RBAM_017160___ymzA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02791___ymzA-RBAM_017160___ymzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02791___ymzA-RBAM_017160___ymzA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02791___ymzA
# 2: RBAM_017160___ymzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 164/231 (71.0%)
# Similarity: 164/231 (71.0%)
# Gaps: 15/231 ( 6.5%)
# Score: 602.0
#
#
#=======================================
BSNT_02791___ 1 ATGAAGCATAAAGTGATCGTGAATCATTGGGAAGAAATTTGCGAAGATGA 50
.||||.||.||.|||||..|.||.|||||||||||||..||.||||||||
RBAM_017160__ 1 TTGAAACACAAGGTGATAATCAACCATTGGGAAGAAACCTGTGAAGATGA 50
BSNT_02791___ 51 TTCTTGCTATGAATACGGAACAAGTATCATTGTGAACGGAAAAGAATTAA 100
|||.|||||||||||.|||||.||.|||||.||..||||.||||||.|.|
RBAM_017160__ 51 TTCCTGCTATGAATATGGAACCAGCATCATCGTTGACGGCAAAGAACTGA 100
BSNT_02791___ 101 TCAGAGAAGCGTCAATTATCACTGCTTTGAAGGCGGTTTTAGAAGAGATC 150
|||||||.||.||.||.|..|..|||.||||.||.||..|..||||.|||
RBAM_017160__ 101 TCAGAGAGGCTTCCATCACAAGCGCTCTGAAAGCCGTACTGAAAGAAATC 150
BSNT_02791___ 151 GGCGCGGATGTTGAAATAGAAGAAACAGTAGAGAGCGAAAAATGCTGTGA 200
||.||.|||||.||.||.||||||||.||.||.|||||||||...|||||
RBAM_017160__ 151 GGTGCTGATGTGGAGATTGAAGAAACCGTTGAAAGCGAAAAAAAATGTGA 200
BSNT_02791___ 201 TAGCTTAAGAAAAAAAAATCTAGACTACTAA 231
| .||||..|||||.||
RBAM_017160__ 201 T-TCTTACAAAAAATAA-------------- 216
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