Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02788 and RBAM_017130

See DNA alignment / Visit BSNT_02788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02788___miaA.1.9828.seq
#    -bsequence pep-align/RBAM_017130___miaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02788___miaA-RBAM_017130___miaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02788___miaA-RBAM_017130___miaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02788___miaA
# 2: RBAM_017130___miaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     258/314 (82.2%)
# Similarity:   278/314 (88.5%)
# Gaps:           0/314 ( 0.0%)
# Score: 1314.0
# 
#
#=======================================

BSNT_02788___      1 MNNTKQPVVILVGPTAVGKTNLSIQLAKSLNAEIISGDSMQIYKGMDIGT     50
                     |.|.||||||||||||||||.|||.|||.||||||||||||:||||||||
RBAM_017130__      1 MKNKKQPVVILVGPTAVGKTKLSIGLAKMLNAEIISGDSMQVYKGMDIGT     50

BSNT_02788___     51 AKITEQEMEGVPHHLIDILDPQDSFSTADYQSLVRNKISEIANRGKLPMI    100
                     ||:||:|.|||||||||||:|.|:|||||||.:||.||:|||:|||||||
RBAM_017130__     51 AKVTEEETEGVPHHLIDILEPSDTFSTADYQKMVRGKITEIADRGKLPMI    100

BSNT_02788___    101 VGGTGLYIQSVLYDYTFTEEANDPVFRESMQVAAEREGADFLHAKLAAAD    150
                     |||||||||||||||||||.:.||||||.|:..|..|||:.|||||||||
RBAM_017130__    101 VGGTGLYIQSVLYDYTFTENSGDPVFRERMEKLAAEEGAEALHAKLAAAD    150

BSNT_02788___    151 PEAAAAIHPNNTRRVIRALEILHTSGKTMSQHLKEQKRELLYNAVLIGLT    200
                     ||||||||.||||||||||||||.||||||:|||.|||||||||||||||
RBAM_017130__    151 PEAAAAIHQNNTRRVIRALEILHVSGKTMSEHLKTQKRELLYNAVLIGLT    200

BSNT_02788___    201 MDRDTLYERINQRVDLMMESGLLPEVKRLYDKNVRDCQSIQAIGYKELYA    250
                     |||:.||.|||:|||||:|:|||.|||||||.|:||.||||||||||||.
RBAM_017130__    201 MDREVLYGRINERVDLMLETGLLDEVKRLYDMNIRDSQSIQAIGYKELYE    250

BSNT_02788___    251 YFDGFVTLSDAVEQLKQNSRRYAKRQLTWFRNKMQVTWFDMTPPVDMELK    300
                     |.||.|.|..||||||||||||||||||||||||.|:|.|||||||:|.|
RBAM_017130__    251 YLDGKVPLPQAVEQLKQNSRRYAKRQLTWFRNKMPVSWTDMTPPVDIEQK    300

BSNT_02788___    301 KKEIFTHIAGKLEL    314
                     |||||..||||||:
RBAM_017130__    301 KKEIFECIAGKLEI    314


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