Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02787 and RBAM_017120

See DNA alignment / Visit BSNT_02787 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02787___ymaF.1.9828.seq
#    -bsequence pep-align/RBAM_017120___ymaF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02787___ymaF-RBAM_017120___ymaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02787___ymaF-RBAM_017120___ymaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02787___ymaF
# 2: RBAM_017120___ymaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:     108/134 (80.6%)
# Similarity:   118/134 (88.1%)
# Gaps:           0/134 ( 0.0%)
# Score: 633.0
# 
#
#=======================================

BSNT_02787___      1 MGLYQSDWSKAPPHAHAYHVKTTREQGHYHLIEGFTQPANGSNTDQHTHY     50
                     ||||||||||.|||.|||...|...||||||||||:||.||||||||||:
RBAM_017120__      1 MGLYQSDWSKKPPHTHAYRAVTDVVQGHYHLIEGFSQPENGSNTDQHTHF     50

BSNT_02787___     51 YTGITSFENGHFHRYYGISGPAIPLADGTHYHEIEETTYLAYNEPIEIQY    100
                     ||||||||||||||||||||||||..|||||||:.|||:.||||||:||:
RBAM_017120__     51 YTGITSFENGHFHRYYGISGPAIPRVDGTHYHELSETTFAAYNEPIQIQH    100

BSNT_02787___    101 GGVVYDPGDDRRKTHRHNLKGKTREIVGNEPLGW    134
                     |||||||.::.||||||.|||||||:|||||:||
RBAM_017120__    101 GGVVYDPREEGRKTHRHTLKGKTREVVGNEPIGW    134


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