Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02785 and RBAM_017110

See DNA alignment / Visit BSNT_02785 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02785.1.9828.seq
#    -bsequence pep-align/RBAM_017110___ebrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02785-RBAM_017110___ebrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02785-RBAM_017110___ebrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02785
# 2: RBAM_017110___ebrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 105
# Identity:      60/105 (57.1%)
# Similarity:    71/105 (67.6%)
# Gaps:          21/105 (20.0%)
# Score: 314.0
# 
#
#=======================================

BSNT_02785         1 --------------------MLKVSDGFKKWKPSALVVIGYSLAFYMLSL     30
                                         |||||.||.::.||||||.|||||||||||
RBAM_017110__      1 MILGYIFLTIAILSESIGAAMLKVSRGFTRFLPSALVVAGYSLAFYMLSL     50

BSNT_02785        31 TLNHIPLSLSYATWSGAGTVLTTVIGVKWFKEDLNAKGLIGILLLLSGVV     80
                     |||.|||||||||||||||||.::||.|||.|.|:.:.:||:..||:||:
RBAM_017110__     51 TLNLIPLSLSYATWSGAGTVLASIIGAKWFHEKLDKQAVIGLFFLLAGVI    100

BSNT_02785        81 LLNWP     85
                     |:|| 
RBAM_017110__    101 LMNW-    104


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