Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02783 and RBAM_017090

See DNA alignment / Visit BSNT_02783 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02783___ymaD.1.9828.seq
#    -bsequence pep-align/RBAM_017090___ymaD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02783___ymaD-RBAM_017090___ymaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02783___ymaD-RBAM_017090___ymaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02783___ymaD
# 2: RBAM_017090___ymaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     117/150 (78.0%)
# Similarity:   129/150 (86.0%)
# Gaps:           0/150 ( 0.0%)
# Score: 610.0
# 
#
#=======================================

BSNT_02783___      1 MADHHFYLKANWPGNRNDVGTIESGNLITSISIPKEMDGPGEGTNPDEML     50
                     ||.|||||||||||||||||.|:||.|.|::|||||||||||||||||||
RBAM_017090__      1 MAKHHFYLKANWPGNRNDVGDIKSGRLETAVSIPKEMDGPGEGTNPDEML     50

BSNT_02783___     51 LGAAATCYIITLAAMMERSGLEKEDLQMESEGIVDVTKGVFTYKKIIHRP    100
                     |||||||||||||||||||||:||||.||||||||||.|||||:||||||
RBAM_017090__     51 LGAAATCYIITLAAMMERSGLDKEDLHMESEGIVDVTNGVFTYQKIIHRP    100

BSNT_02783___    101 SVVLKHDASQDDVALAHKLCKKAESSCMISRAIQGNVVLQLEASVKLGGE    150
                     .::||.||::.|..||.||..|||||||||||:||||.::||..||....
RBAM_017090__    101 FILLKPDAAETDFTLARKLAHKAESSCMISRAVQGNVEMELEVEVKAARA    150


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