Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02780 and RBAM_017070

See DNA alignment / Visit BSNT_02780 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02780.1.9828.seq
#    -bsequence pep-align/RBAM_017070___aprX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02780-RBAM_017070___aprX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02780-RBAM_017070___aprX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02780
# 2: RBAM_017070___aprX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity:     314/442 (71.0%)
# Similarity:   353/442 (79.9%)
# Gaps:          52/442 (11.8%)
# Score: 1679.0
# 
#
#=======================================

BSNT_02780         0 --------------------------------------------------      0
                                                                       
RBAM_017070__      1 MFGYSMVQMVRSNAHKLDWPLRENVLQLYKPFKWTPCFLHKFFEKKVKNR     50

BSNT_02780         1 --MSVIIEFEEGCHETGFQMAGEVLQKEKRSKLKSRFNKINCCSAEVTPS     48
                       |||||||||||||:||...|:||.||||..:|.:|..|||||||||||
RBAM_017070__     51 KKMSVIIEFEEGCHESGFHSTGQVLSKEKRCTIKKQFQTINCCSAEVTPS    100

BSNT_02780        49 ALHSLLSECSNIRKVYLNREVKALLDTATEASHAKEVVRNGQTLTGKGVT     98
                     |||.|||:|.:|||:|||||||||||||.|:||||||.|||..|||||||
RBAM_017070__    101 ALHMLLSQCRDIRKIYLNREVKALLDTAAESSHAKEVTRNGTVLTGKGVT    150

BSNT_02780        99 VAVVDTGIYPHPDLEGRIIGFADMVNQKTEPYDDNGHGTHCAGDVASSGA    148
                     |||:|||||.|||||||:|||||.||||||||||||||||||||:|||||
RBAM_017070__    151 VAVIDTGIYQHPDLEGRVIGFADFVNQKTEPYDDNGHGTHCAGDIASSGA    200

BSNT_02780       149 SSSGQYRGPAPEANLIGVKVLNKQGSGTLADIIEGVEWCIQYNEDNPDEP    198
                     ||||:|:||||||:|||||||||.|||||||||||||||||||:::...|
RBAM_017070__    201 SSSGKYQGPAPEADLIGVKVLNKSGSGTLADIIEGVEWCIQYNKEHTKNP    250

BSNT_02780       199 IDIISMSLGGDALRYDHEQEDPLVRAVEEAWSAGIVVCVAAGNSGPDSQT    248
                     |.||||||||||||||.|.:||||:|||:||:.|||||||||||||::||
RBAM_017070__    251 IRIISMSLGGDALRYDKETDDPLVKAVEKAWNEGIVVCVAAGNSGPEAQT    300

BSNT_02780       249 IASPGVSEKVITVGALDDNNTASSDDDTVASFSSRGPTVYGKEKPDILAP    298
                     |:|||||||||||||.|||:||.::|||||||||||||||||||||||||
RBAM_017070__    301 ISSPGVSEKVITVGAYDDNDTAGNEDDTVASFSSRGPTVYGKEKPDILAP    350

BSNT_02780       299 GVNIISLRSPNSYIDKLQKSSRVGSQYFTMSGTSMATPICAGIAALILQH    348
                     ||:|:|||||.||:||||||:||||.||::|||||||||||||||||||.
RBAM_017070__    351 GVDIVSLRSPRSYLDKLQKSNRVGSLYFSLSGTSMATPICAGIAALILQQ    400

BSNT_02780       349 NPDLTPDEVKELLKNGTDKWKDEDPNIYGAGAVNAENSVPGQ    390
                     ||.|:|||||.|:|...|:|.:|||||||||||||||:||.:
RBAM_017070__    401 NPQLSPDEVKTLIKQSPDQWTNEDPNIYGAGAVNAENAVPKE    442


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