Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02780 and RBAM_017070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence pep-align/BSNT_02780.1.9828.seq
# -bsequence pep-align/RBAM_017070___aprX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02780-RBAM_017070___aprX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02780-RBAM_017070___aprX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02780
# 2: RBAM_017070___aprX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 314/442 (71.0%)
# Similarity: 353/442 (79.9%)
# Gaps: 52/442 (11.8%)
# Score: 1679.0
#
#
#=======================================
BSNT_02780 0 -------------------------------------------------- 0
RBAM_017070__ 1 MFGYSMVQMVRSNAHKLDWPLRENVLQLYKPFKWTPCFLHKFFEKKVKNR 50
BSNT_02780 1 --MSVIIEFEEGCHETGFQMAGEVLQKEKRSKLKSRFNKINCCSAEVTPS 48
|||||||||||||:||...|:||.||||..:|.:|..|||||||||||
RBAM_017070__ 51 KKMSVIIEFEEGCHESGFHSTGQVLSKEKRCTIKKQFQTINCCSAEVTPS 100
BSNT_02780 49 ALHSLLSECSNIRKVYLNREVKALLDTATEASHAKEVVRNGQTLTGKGVT 98
|||.|||:|.:|||:|||||||||||||.|:||||||.|||..|||||||
RBAM_017070__ 101 ALHMLLSQCRDIRKIYLNREVKALLDTAAESSHAKEVTRNGTVLTGKGVT 150
BSNT_02780 99 VAVVDTGIYPHPDLEGRIIGFADMVNQKTEPYDDNGHGTHCAGDVASSGA 148
|||:|||||.|||||||:|||||.||||||||||||||||||||:|||||
RBAM_017070__ 151 VAVIDTGIYQHPDLEGRVIGFADFVNQKTEPYDDNGHGTHCAGDIASSGA 200
BSNT_02780 149 SSSGQYRGPAPEANLIGVKVLNKQGSGTLADIIEGVEWCIQYNEDNPDEP 198
||||:|:||||||:|||||||||.|||||||||||||||||||:::...|
RBAM_017070__ 201 SSSGKYQGPAPEADLIGVKVLNKSGSGTLADIIEGVEWCIQYNKEHTKNP 250
BSNT_02780 199 IDIISMSLGGDALRYDHEQEDPLVRAVEEAWSAGIVVCVAAGNSGPDSQT 248
|.||||||||||||||.|.:||||:|||:||:.|||||||||||||::||
RBAM_017070__ 251 IRIISMSLGGDALRYDKETDDPLVKAVEKAWNEGIVVCVAAGNSGPEAQT 300
BSNT_02780 249 IASPGVSEKVITVGALDDNNTASSDDDTVASFSSRGPTVYGKEKPDILAP 298
|:|||||||||||||.|||:||.::|||||||||||||||||||||||||
RBAM_017070__ 301 ISSPGVSEKVITVGAYDDNDTAGNEDDTVASFSSRGPTVYGKEKPDILAP 350
BSNT_02780 299 GVNIISLRSPNSYIDKLQKSSRVGSQYFTMSGTSMATPICAGIAALILQH 348
||:|:|||||.||:||||||:||||.||::|||||||||||||||||||.
RBAM_017070__ 351 GVDIVSLRSPRSYLDKLQKSNRVGSLYFSLSGTSMATPICAGIAALILQQ 400
BSNT_02780 349 NPDLTPDEVKELLKNGTDKWKDEDPNIYGAGAVNAENSVPGQ 390
||.|:|||||.|:|...|:|.:|||||||||||||||:||.:
RBAM_017070__ 401 NPQLSPDEVKTLIKQSPDQWTNEDPNIYGAGAVNAENAVPKE 442
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