Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02775 and RBAM_017060

See DNA alignment / Visit BSNT_02775 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:43
# Commandline: needle
#    -asequence pep-align/BSNT_02775___ymzB.1.9828.seq
#    -bsequence pep-align/RBAM_017060___ymzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02775___ymzB-RBAM_017060___ymzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02775___ymzB-RBAM_017060___ymzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02775___ymzB
# 2: RBAM_017060___ymzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      84/120 (70.0%)
# Similarity:    99/120 (82.5%)
# Gaps:           2/120 ( 1.7%)
# Score: 433.0
# 
#
#=======================================

BSNT_02775___      1 MAHTNTQLSQWLESKVGQTLDIRKGELTHD-EEISDLDQIVLHLQKVAIR     49
                     ||.|||:||:||:.::||||||||||||.. .||||:|||:|||..|.:|
RBAM_017060__      1 MALTNTELSEWLQKQIGQTLDIRKGELTDSRNEISDMDQIMLHLDDVLVR     50

BSNT_02775___     50 STNHPDDYVAKEELVLEGEGTTFTEDGNVPLPQNAYEIPLLGDIHIHQEN     99
                     .|||||||||.|||||:|.|||:||:|||||||:||||||||||.|.:|.
RBAM_017060__     51 RTNHPDDYVADEELVLKGHGTTYTEEGNVPLPQDAYEIPLLGDITIQKEQ    100

BSNT_02775___    100 EGLKVVTDRAVYTIDIQHS-    118
                     :||||.||||||||..:.. 
RBAM_017060__    101 DGLKVHTDRAVYTIGTRKEQ    120


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