Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02754 and RBAM_016880

See DNA alignment / Visit BSNT_02754 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:43
# Commandline: needle
#    -asequence pep-align/BSNT_02754___mutS.1.9828.seq
#    -bsequence pep-align/RBAM_016880___mutS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02754___mutS-RBAM_016880___mutS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02754___mutS-RBAM_016880___mutS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02754___mutS
# 2: RBAM_016880___mutS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 862
# Identity:     759/862 (88.1%)
# Similarity:   812/862 (94.2%)
# Gaps:           4/862 ( 0.5%)
# Score: 3889.0
# 
#
#=======================================

BSNT_02754___      1 -MAGYTPMIQQYLKIKAEHQDAFLFFRLGDFYEMFFEDAKKASQELEITL     49
                      ||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016880__      1 MMASYTPMIQQYLKIKAEHQDAFLFFRLGDFYEMFFEDAKKASQELEITL     50

BSNT_02754___     50 TSRDGGAAEKIPMCGVPYHSASAYIEQLIKKGYKVAICEQTEDPKAAKGV     99
                     ||||||:|:||||||||||||:||||||||||||||||||||||||||||
RBAM_016880__     51 TSRDGGSADKIPMCGVPYHSAAAYIEQLIKKGYKVAICEQTEDPKAAKGV    100

BSNT_02754___    100 VKREVVQLITPGTVMDGKGIHESENNFIASVSACSNRYGLALSDLTTGEN    149
                     ||||||||||||||||||||||||||||||||...:.|||||||||||||
RBAM_016880__    101 VKREVVQLITPGTVMDGKGIHESENNFIASVSEFRDGYGLALSDLTTGEN    150

BSNT_02754___    150 LAVLIERLEDVISEIYSVGAREIVVSGGLDADTVAQLRERCGATISIEDG    199
                     |||.|||:|||:||||||.|:|||||...:..|.|||:||||||||||||
RBAM_016880__    151 LAVFIERIEDVMSEIYSVSAKEIVVSSKFNEHTAAQLKERCGATISIEDG    200

BSNT_02754___    200 ETDEHVTIIEHLNNEDITKTFLRLYTYLKRTQKRSLDHLQPVQVYELEEA    249
                     |..|.:.|.:||..|::|:||:||||||::||||||||||||||||||||
RBAM_016880__    201 EITERIEIAKHLPGEELTETFMRLYTYLQKTQKRSLDHLQPVQVYELEEA    250

BSNT_02754___    250 MKIDLYSKRNLELTETIRSKNKKGSLLWLLDETKTAMGGRLLKQWIDRPL    299
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_016880__    251 MKIDLYSKRNLELTETIRSKSKKGSLLWLLDETKTAMGGRLLKQWIDRPL    300

BSNT_02754___    300 IRVNQIEERQEMVETLMSHFFEREDLRERLKEVYDLERLAGRVAFGNVNA    349
                     ||.:||||||||||||::|.||||||||||||||||||||||||||||||
RBAM_016880__    301 IRASQIEERQEMVETLINHLFEREDLRERLKEVYDLERLAGRVAFGNVNA    350

BSNT_02754___    350 RDLIQLKESLKQVPGIKQLVASLAHDKAKERAKRIDPCGDVLELLEEALY    399
                     ||||||||||||||.||:||.||.|.||||||..||||||:|:||||||:
RBAM_016880__    351 RDLIQLKESLKQVPSIKELVGSLNHKKAKERAGLIDPCGDLLDLLEEALH    400

BSNT_02754___    400 ENPPLSVKEGNLIKDGYNQKLDEYRDASRNGKDWIARLEQQEREYTGIRS    449
                     ||||||:||||||||||:||||||||||:||||||||||||||.||||||
RBAM_016880__    401 ENPPLSLKEGNLIKDGYHQKLDEYRDASKNGKDWIARLEQQERAYTGIRS    450

BSNT_02754___    450 LKVGFNKVFGYYIEVTKANLHLLEEGRYERKQTLTNAERYITPELKEKEA    499
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_016880__    451 LKVGFNKVFGYYIEVTKANLHLLEDGRYERKQTLTNAERYITPELKEKEA    500

BSNT_02754___    500 LILEAENNICELEYELFTELREKVKQYIPRLQQLAKQMSELDALQCFATI    549
                     |||||||||||||||||..|||||||:|||||:|||||||||||||||||
RBAM_016880__    501 LILEAENNICELEYELFAVLREKVKQFIPRLQRLAKQMSELDALQCFATI    550

BSNT_02754___    550 SENRHYTKPEFSKDEVEVIEGRHPVVEKVMDSQEYVPNNCMMGDNRQMLL    599
                     |||||||||.||.:||:|||||||||||||||||||||||:|||:|:|||
RBAM_016880__    551 SENRHYTKPVFSDNEVKVIEGRHPVVEKVMDSQEYVPNNCLMGDSREMLL    600

BSNT_02754___    600 ITGPNMSGKSTYMRQIALISIMAQIGCFVPAKKAVLPIFDQIFTRIGAAD    649
                     ||||||||||||||||||:|||||||||||||:|||||||||||||||||
RBAM_016880__    601 ITGPNMSGKSTYMRQIALLSIMAQIGCFVPAKEAVLPIFDQIFTRIGAAD    650

BSNT_02754___    650 DLISGQSTFMVEMLEAKNAIVNATKNSLILFDEIGRGTSTYDGMALAQAI    699
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_016880__    651 DLISGQSTFMVEMLEAKNAIVNATKDSLILFDEIGRGTSTYDGMALAQAI    700

BSNT_02754___    700 IEYVHDHIGAKTLFSTHYHELTVLEDKLPQLKNVHVRAEEYNGTVVFLHQ    749
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016880__    701 IEYVHDHIGAKTLFSTHYHELTVLEDKLPQLKNVHVRAEEYNGTVVFLHQ    750

BSNT_02754___    750 IKEGAADKSYGIHVAQLAELPGDLIARAQDILKELEHSGNKPEVPV---Q    796
                     |||||||||||||||||||||.|||:|||:|||:||.:|:|||:|.   :
RBAM_016880__    751 IKEGAADKSYGIHVAQLAELPDDLISRAQEILKQLEQTGDKPELPAVSEK    800

BSNT_02754___    797 KPQVKEEPAQLSFFDEAEKPAETPKLSKKEKQVIDAFKSLNILDMTPLEA    846
                     |..|:|||||||||.:.||..:.|.:|.|||||::||||:||||||||||
RBAM_016880__    801 KSAVREEPAQLSFFADGEKEQKAPAVSNKEKQVLEAFKSINILDMTPLEA    850

BSNT_02754___    847 MNEMYKLQKKLH    858
                     |||||||||||.
RBAM_016880__    851 MNEMYKLQKKLK    862


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02754 and RBAM_016880

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
