Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02751 and RBAM_016860

See DNA alignment / Visit BSNT_02751 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_02751___ymcA.1.9828.seq
#    -bsequence pep-align/RBAM_016860___ymcA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02751___ymcA-RBAM_016860___ymcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02751___ymcA-RBAM_016860___ymcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02751___ymcA
# 2: RBAM_016860___ymcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     131/143 (91.6%)
# Similarity:   138/143 (96.5%)
# Gaps:           0/143 ( 0.0%)
# Score: 653.0
# 
#
#=======================================

BSNT_02751___      1 MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIK     50
                     |||||||||||||||||||||||||||||||||||||||:|||.|:||||
RBAM_016860__      1 MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENEKVSAIINQIK     50

BSNT_02751___     51 ALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPVIQEFRDSQMEVND    100
                     .|||||||||||||.|||||||:||||||||||.||:||||||||:||||
RBAM_016860__     51 TLQKQAVNLKHYEKLEALKQVESKIDALQEELEGIPIIQEFRDSQIEVND    100

BSNT_02751___    101 LLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL    143
                     |||||||||||||||||||||||:||.|||||||||||||||:
RBAM_016860__    101 LLQLVAHTISNQVTNEIITSTGGNLLTGETGSKVKHSNNSCSI    143


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