Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02751 and RBAM_016860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence dna-align/BSNT_02751___ymcA.1.9828.seq
# -bsequence dna-align/RBAM_016860___ymcA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02751___ymcA-RBAM_016860___ymcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02751___ymcA-RBAM_016860___ymcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02751___ymcA
# 2: RBAM_016860___ymcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 432
# Identity: 360/432 (83.3%)
# Similarity: 360/432 (83.3%)
# Gaps: 0/432 ( 0.0%)
# Score: 1512.0
#
#
#=======================================
BSNT_02751___ 1 ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGC 50
||||||||.|||||.||.|||||||||||.||||||||..|.||||||||
RBAM_016860__ 1 ATGACGCTTTACTCTAAGAAAGACATTGTACAGCAGGCTAGGAACCTTGC 50
BSNT_02751___ 51 AAAAATGATTTCTGAAACAGAAGAGGTTGATTTTTTCAAACGGGCTGAAG 100
.|||||||||||||||||||||||.|||||||||||||||||.||.||.|
RBAM_016860__ 51 GAAAATGATTTCTGAAACAGAAGAAGTTGATTTTTTCAAACGCGCCGAGG 100
BSNT_02751___ 101 CGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAA 150
||||.||.||.||.|||||.|||||.||..|.||..||||||||||||||
RBAM_016860__ 101 CGCAGATTAACGAAAATGAAAAAGTCTCTGCGATTATTAATCAGATTAAA 150
BSNT_02751___ 151 GCCCTGCAAAAGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGC 200
.|||||||||||||.||.||.||.||||||||.||.|||||||.||||||
RBAM_016860__ 151 ACCCTGCAAAAGCAAGCCGTTAACCTGAAGCACTACGAAAAGCTTGAAGC 200
BSNT_02751___ 201 GCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAAGAGCTTGAAG 250
|||.||||||||.|||...|||||||||||.|||||.|||||||||||||
RBAM_016860__ 201 GCTGAAACAAGTGGAAAGTAAAATTGACGCCCTGCAGGAAGAGCTTGAAG 250
BSNT_02751___ 251 AGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGAC 300
.||||||..|.||.||||||||||||||.||.|||||.||.||.||||||
RBAM_016860__ 251 GGATTCCGATCATTCAGGAATTCAGAGATTCCCAGATTGAGGTCAATGAC 300
BSNT_02751___ 301 CTACTGCAGCTCGTTGCACACACCATTTCCAACCAAGTCACAAATGAAAT 350
||.||.|||||.||.|||||.||.||.||.||.||.||.|||||.|||||
RBAM_016860__ 301 CTTCTTCAGCTTGTCGCACATACGATCTCAAATCAGGTGACAAACGAAAT 350
BSNT_02751___ 351 CATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG 400
|||.|||||.|||||||||.|||||||||..||.||||||||||||||.|
RBAM_016860__ 351 CATTACATCTACCGGAGGCAACCTGCTGACGGGAGAAACCGGTTCAAAAG 400
BSNT_02751___ 401 TGAAGCATTCAAATAACAGCTGTTCTCTCTAA 432
|.||.|||||.|||||||||||||||.|.|||
RBAM_016860__ 401 TAAAACATTCGAATAACAGCTGTTCTATTTAA 432
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