Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02742 and RBAM_016790
See
DNA alignment /
Visit
BSNT_02742 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence pep-align/BSNT_02742___pbpX.1.9828.seq
# -bsequence pep-align/RBAM_016790___pbpX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02742___pbpX-RBAM_016790___pbpX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02742___pbpX-RBAM_016790___pbpX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02742___pbpX
# 2: RBAM_016790___pbpX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 275/399 (68.9%)
# Similarity: 323/399 (81.0%)
# Gaps: 14/399 ( 3.5%)
# Score: 1393.5
#
#
#=======================================
BSNT_02742___ 1 MTSPTRRRTAKHRRRKLNKRGKLLLGLLAVMVCITIW--NALHRNSE--E 46
||||.|.|..|.|::||.|.|.|.|.||.|.|.|.|| .|.||..| :
RBAM_016790__ 1 MTSPRRTRINKKRKKKLMKTGGLFLFLLLVTVFIMIWTVTAHHREKESVK 50
BSNT_02742___ 47 NEPSQETAAVSNT--DQKKEVKKKTAKKSEEQIKTVDRNQKISNYLEEIG 94
|.| ||.|:| ||.::.|:||.| |:..|::|.|::|||||::||
RBAM_016790__ 51 NAP----AAQSDTSKDQTQQKKEKTQK--EKTPKSIDHNKQISNYLQQIG 94
BSNT_02742___ 95 FSGTAMIVRNGEIVTNKGFGYADRKHYIQNNPLTSFYVGSSQKALIATAI 144
||||||||::|::|..|||||||||..|:|||.||:|:|||||||||||:
RBAM_016790__ 95 FSGTAMIVKDGKVVLKKGFGYADRKQKIKNNPETSYYIGSSQKALIATAV 144
BSNT_02742___ 145 LQLEEKGKLQTSDPVSTYLPHFPNGQTITLKNLLTHTSGINGHIEGDGAI 194
|||||||.||||||||||||:||||..|||||||.|||||||||||.|.|
RBAM_016790__ 145 LQLEEKGLLQTSDPVSTYLPNFPNGTRITLKNLLNHTSGINGHIEGQGPI 194
BSNT_02742___ 195 TPDDLIKDIELQGIKRQPGVWDYQDSNYSVLAYIIAEVSGEPYEQYIKNH 244
:|.|||||||.:|||||||||||:||||||||||:::||||.||||||.|
RBAM_016790__ 195 SPIDLIKDIEYRGIKRQPGVWDYRDSNYSVLAYIVSQVSGESYEQYIKEH 244
BSNT_02742___ 245 IFKPAGMTHAGFYKTYEKEPYPAVGYKM-KGGKTVTPYIPDLSQLYGAGD 293
:||||||.|||||||:.|..|||||||: :.|..|||::.||||||||||
RBAM_016790__ 245 VFKPAGMKHAGFYKTFAKAKYPAVGYKVDESGSLVTPHLLDLSQLYGAGD 294
BSNT_02742___ 294 IYMSAIDMYKFDQALIDGKLYSQKSYEKMFTPGSSSTYGMGFYVDPGSYS 343
:||||.|:||||:|:::|.|.|::|:.||||.|||:.||||||:||||||
RBAM_016790__ 295 MYMSAEDLYKFDKAIVNGTLLSKESFTKMFTAGSSAAYGMGFYIDPGSYS 344
BSNT_02742___ 344 NHGVMPGFNILNSFSKSGQTIVILFSNIQNNAKLGQVNNKIYQLLNQE- 391
|||||||:|||||||.|....|||.||||||||||||||:|||||||.
RBAM_016790__ 345 NHGVMPGYNILNSFSHSASKYVILLSNIQNNAKLGQVNNRIYQLLNQAD 393
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.