Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02740 and RBAM_016780

See DNA alignment / Visit BSNT_02740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_02740___recA.1.9828.seq
#    -bsequence pep-align/RBAM_016780___recA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02740___recA-RBAM_016780___recA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02740___recA-RBAM_016780___recA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02740___recA
# 2: RBAM_016780___recA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity:     337/348 (96.8%)
# Similarity:   343/348 (98.6%)
# Gaps:           1/348 ( 0.3%)
# Score: 1676.0
# 
#
#=======================================

BSNT_02740___      1 MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016780__      1 MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALG     50

BSNT_02740___     51 IGGYPRGRIIEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPV    100
                     ||||||||||||||||||||||||||||||||::||||||||||||||||
RBAM_016780__     51 IGGYPRGRIIEVYGPESSGKTTVALHAIAEVQEKGGQAAFIDAEHALDPV    100

BSNT_02740___    101 YAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016780__    101 YAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPK    150

BSNT_02740___    151 AEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVM    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016780__    151 AEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVM    200

BSNT_02740___    201 FGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTKIKVVKNKVA    250
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_016780__    201 FGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTRIKVVKNKVA    250

BSNT_02740___    251 PPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGR    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016780__    251 PPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGR    300

BSNT_02740___    301 ENAKQFLKENKDIMLMIQEQIREHYGLDNNGVVQQQAEETQEELEFEE    348
                     |||||||||||||||||||||||:||||||||. .:|||.|||:|.||
RBAM_016780__    301 ENAKQFLKENKDIMLMIQEQIREYYGLDNNGVT-DKAEEVQEEMELEE    347


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