Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02738 and RBAM_016760
See
DNA alignment /
Visit
BSNT_02738 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence pep-align/BSNT_02738___pgsA.1.9828.seq
# -bsequence pep-align/RBAM_016760___pgsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02738___pgsA-RBAM_016760___pgsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02738___pgsA-RBAM_016760___pgsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02738___pgsA
# 2: RBAM_016760___pgsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 173/193 (89.6%)
# Similarity: 184/193 (95.3%)
# Gaps: 0/193 ( 0.0%)
# Score: 912.0
#
#
#=======================================
BSNT_02738___ 1 MFNLPNKITLARIALIPIFMIIMLAPFDWGRLEVGDESIPVAHLAGAILF 50
|||||||||||||||||:||||||.||.||.:.:||||||||||.||:||
RBAM_016760__ 1 MFNLPNKITLARIALIPVFMIIMLVPFQWGSVHIGDESIPVAHLTGAVLF 50
BSNT_02738___ 51 IIASTTDWVDGYYARKLNLVTNFGKFLDPLADKLLVSAALIILVQFDLTP 100
|||||||||||||||||||||||||||||||||||||||||.||||||.|
RBAM_016760__ 51 IIASTTDWVDGYYARKLNLVTNFGKFLDPLADKLLVSAALITLVQFDLAP 100
BSNT_02738___ 101 AWMVIVIISREFAVTGLRLVLAGTGEVVAANMLGKIKTWAQIIAVSALLL 150
|||||:|||||||||||||||||||||||||||||||||||||||:||||
RBAM_016760__ 101 AWMVIIIISREFAVTGLRLVLAGTGEVVAANMLGKIKTWAQIIAVAALLL 150
BSNT_02738___ 151 HNLPFELVSFPFADLALWVAVFFTVVSGWEYFSKNWEALKTSN 193
||||||||||||.|:||||||.|||:|||:||:|||:||||||
RBAM_016760__ 151 HNLPFELVSFPFGDIALWVAVLFTVISGWDYFAKNWDALKTSN 193
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.