Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02738 and RBAM_016760

See Amino acid alignment / Visit BSNT_02738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence dna-align/BSNT_02738___pgsA.1.9828.seq
#    -bsequence dna-align/RBAM_016760___pgsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02738___pgsA-RBAM_016760___pgsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02738___pgsA-RBAM_016760___pgsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02738___pgsA
# 2: RBAM_016760___pgsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity:     455/586 (77.6%)
# Similarity:   455/586 (77.6%)
# Gaps:           8/586 ( 1.4%)
# Score: 1741.0
# 
#
#=======================================

BSNT_02738___      1 ATGTTTAACTTACCAAATAAAATCACACTAGCTAGAATCGCATTAATCCC     50
                     ||||||||||||||.||||||||||||||.||.||||||||.|||||.||
RBAM_016760__      1 ATGTTTAACTTACCGAATAAAATCACACTGGCAAGAATCGCTTTAATTCC     50

BSNT_02738___     51 AATCTTCATGATTATCATGCTGGCGCCGTTTGACTGGGGCAG-GCTCGAA     99
                     ..|.||.||||||||||||||.|..||.|||.|.|||||||| |.|| |.
RBAM_016760__     51 TGTATTTATGATTATCATGCTTGTTCCTTTTCAGTGGGGCAGCGTTC-AT     99

BSNT_02738___    100 GTTGGAGACGAATCGATCCCGGTCGCACATTTGGCGGGGGCCATTCTATT    149
                     .|.||.||.||||||||.||||||||.|||.|..||||.||..||.|.||
RBAM_016760__    100 ATAGGGGATGAATCGATTCCGGTCGCGCATCTTACGGGAGCTGTTTTGTT    149

BSNT_02738___    150 TATTATTGCATCTACAACAGACTGGGTGGACGGGTATTATGCCCGAAAAT    199
                     .|||||.|||||.||.||.|||||||||||.||.||.||.|||.|||||.
RBAM_016760__    150 CATTATCGCATCAACGACTGACTGGGTGGATGGCTACTACGCCAGAAAAC    199

BSNT_02738___    200 TGAATCTCGTAACAAACTTCGGGAAATTTCTTGATCCGCTTGCGGACAAA    249
                     ||||.||.||.||||||||||||||||||.|.||||||||.||.||||||
RBAM_016760__    200 TGAACCTAGTGACAAACTTCGGGAAATTTTTAGATCCGCTGGCTGACAAA    249

BSNT_02738___    250 CTGCTGGTATCCGCAGCGTTAATTATCCTTGTTCAATTTGATCTCACTCC    299
                     ||||||||.|||||.||.|||||||..|||||.||.|||||.||..|.||
RBAM_016760__    250 CTGCTGGTGTCCGCGGCATTAATTACGCTTGTGCAGTTTGACCTTGCGCC    299

BSNT_02738___    300 AGCTTGGATGGTCATTGTGATTATCAGCAGGGAGTTTGCCGTGACAGGTT    349
                     .||.|||||||||||..|.||.||||||.|.||.||||||||.||.||.|
RBAM_016760__    300 GGCGTGGATGGTCATCATCATCATCAGCCGCGAATTTGCCGTAACGGGAT    349

BSNT_02738___    350 TAAGGCTTGTCTTAGCCGGAACAGGAGAAGTCGTAGCTGCTAACATGCTT    399
                     ||||.|||||..|.||.|||||.||.|||||.|||||.||.||.|||||.
RBAM_016760__    350 TAAGACTTGTGCTGGCGGGAACGGGGGAAGTTGTAGCCGCCAATATGCTG    399

BSNT_02738___    400 GGTAAAATCAAAACCTGGGCACAGATTATTGCGGTATCCGCATTGCTT--    447
                     ||.|||||.|||||.|||||.|||||.||.||.||..||||   ||||  
RBAM_016760__    400 GGGAAAATTAAAACATGGGCTCAGATCATCGCTGTTGCCGC---GCTTTT    446

BSNT_02738___    448 -CTTCATAATCTTCCATTTGAACTTGTGTCATTCCCGTTTGCAGACTTGG    496
                      ||.|||||||||||.|||||.||.||.||.||||||||.|..||..|.|
RBAM_016760__    447 GCTGCATAATCTTCCGTTTGAGCTCGTTTCTTTCCCGTTCGGCGATATCG    496

BSNT_02738___    497 CACTGTGGGTAGCCGTCTTCTTTACTGTCGTCTCAGGCTGGGAATATTTC    546
                     |..|.|||||.|||||..|.||.||.|||.|.||.||||||||.|||||.
RBAM_016760__    497 CTTTATGGGTGGCCGTGCTGTTCACAGTCATTTCCGGCTGGGATTATTTT    546

BSNT_02738___    547 TCTAAAAACTGGGAAGCGTTAAAAACATCTAACTAA    582
                     .|.||.||||||||.|||||||||||||||||||||
RBAM_016760__    547 GCGAAGAACTGGGATGCGTTAAAAACATCTAACTAA    582


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