Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02737 and RBAM_016750

See DNA alignment / Visit BSNT_02737 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_02737.1.9828.seq
#    -bsequence pep-align/RBAM_016750___ymfM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02737-RBAM_016750___ymfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02737-RBAM_016750___ymfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02737
# 2: RBAM_016750___ymfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     202/306 (66.0%)
# Similarity:   242/306 (79.1%)
# Gaps:          26/306 ( 8.5%)
# Score: 1033.5
# 
#
#=======================================

BSNT_02737         1 MTELGIRLKEAREEKAMSLDDLQAATKIQKRYLTALEEGNYDIIPGKFYV     50
                                     ||||:|||||||||||||||||||||:|||.|||
RBAM_016750__      1 ----------------MSLDELQAATKIQKRYLTALEEGNYDVIPGNFYV     34

BSNT_02737        51 RAFIKQYAEAVGLDADQLFEEHKKDIPNTYHDDVSEKISGMNLQKEMPKP    100
                     ||||||||||||||:||||||:||||||||||||||||||:.:|:|:||.
RBAM_016750__     35 RAFIKQYAEAVGLDSDQLFEEYKKDIPNTYHDDVSEKISGLAVQRELPKS     84

BSNT_02737       101 ASKALELLPTILVILGVIVVIAIVYAIIQFANHKNSDDHNAASEKAITQS    150
                     ||||.|.|||:||::|||:||||:|||||....|:.   ....:||:|||
RBAM_016750__     85 ASKAAEWLPTVLVVIGVIIVIAIIYAIIQLGMSKSG---QTDGDKAVTQS    131

BSNT_02737       151 ESKYEIPKDSTLKENQNNSSEKETDTKKETKENE--DKKKENDSDKLEIK    198
                     ||||||||||.||.:.|.:.|.::|:||:.|:.:  ::|||..|:|.|||
RBAM_016750__    132 ESKYEIPKDSALKNDGNTNDEAQSDSKKDKKDTKVSEQKKEKSSEKTEIK    181

BSNT_02737       199 VAGTEGSLTTYEVSGADKIELELKASDSSWIRVRDENSSSLKEGTLKKDE    248
                     .||||||.::|.||||||.:|||.||||:||||||::..|||||||:|.|
RBAM_016750__    182 AAGTEGSASSYNVSGADKYKLELIASDSAWIRVRDDSGGSLKEGTLQKGE    231

BSNT_02737       249 TYKKDITDQKQVDIRTGYAPNLKIKINGKVLSYELDPKKVMAQTIKIVNK    298
                     |:|||:|||||::|||||||||||||||:||||||:|..||||||.|..|
RBAM_016750__    232 TFKKDVTDQKQIEIRTGYAPNLKIKINGEVLSYELNPHDVMAQTITIKMK    281

BSNT_02737       299 KEEKSS    304
                     |     
RBAM_016750__    282 K-----    282


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