Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02737 and RBAM_016750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02737.1.9828.seq
# -bsequence dna-align/RBAM_016750___ymfM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02737-RBAM_016750___ymfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02737-RBAM_016750___ymfM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02737
# 2: RBAM_016750___ymfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 941
# Identity: 638/941 (67.8%)
# Similarity: 638/941 (67.8%)
# Gaps: 118/941 (12.5%)
# Score: 2225.0
#
#
#=======================================
BSNT_02737 1 GTGACTGAACTAGGAATCCGGCTCAAAGAAGCCAGAGAGGAAAAAGCAAT 50
||
RBAM_016750__ 1 ------------------------------------------------AT 2
BSNT_02737 51 GTCATTGGATGATCTCCAAGCGGCAACAAAGATTCAAAAAAGGTATTTAA 100
||||||||||||.|||||.|||||.||.||.|||||.|||||.||.||||
RBAM_016750__ 3 GTCATTGGATGAACTCCAGGCGGCGACGAAAATTCAGAAAAGATACTTAA 52
BSNT_02737 101 CCGCCTTGGAGGAAGGAAACTATGACATTATTCCGGGGAAGTTTTATGTT 150
||||..||||.|||||.||.||||||.|.|||||.||.||.||||||||.
RBAM_016750__ 53 CCGCTCTGGAAGAAGGCAATTATGACGTCATTCCCGGCAATTTTTATGTA 102
BSNT_02737 151 CGGGCATTCATCAAGCAATATGCAGAAGCCGTTGGGCTTGATGCGGATCA 200
|||||.||.|||||||||||.||.|||||.||.|||||||||.|.|||||
RBAM_016750__ 103 CGGGCGTTTATCAAGCAATACGCTGAAGCTGTCGGGCTTGATTCAGATCA 152
BSNT_02737 201 GCTGTTTGAGGAGCATAAAAAAGATATCCCTAATACGTATCATGACGATG 250
|.|.|||||.||..||||||||||.||||||||.|||||.||||||||||
RBAM_016750__ 153 GTTATTTGAAGAATATAAAAAAGACATCCCTAACACGTACCATGACGATG 202
BSNT_02737 251 TGTCTGAAAAGATCTCCGGCATGAATC------TTCAAAAGGAAATGCCG 294
||||.|||||.|||||||| || |.||||.|||..|.||.
RBAM_016750__ 203 TGTCGGAAAAAATCTCCGG------TCTCGCCGTGCAAAGGGAGCTTCCT 246
BSNT_02737 295 AAGCCAGCATCTAAGGCGCTGGAGCTGCTGCCAACGATACTTGTTATTCT 344
|||.|.||.||.||||||..|||...|||.||.||..|.|||||..|..|
RBAM_016750__ 247 AAGTCCGCTTCAAAGGCGGCGGAATGGCTTCCGACCGTCCTTGTCGTCAT 296
BSNT_02737 345 CGGCGTGATTGTCGTGATTGCCATTGTGTACGCGATCATTCAGTTTGCCA 394
|||.||.|||.||||.||.||.||..|.||.|||||.||||||.|.| .|
RBAM_016750__ 297 CGGTGTCATTATCGTCATCGCGATCATTTATGCGATTATTCAGCTCG-GA 345
BSNT_02737 395 ATCACAAAAACAGTGATGATCACAATGCGGCATCAGAAAAAGCAATTACG 444
||.|..|||.|.|.|..|| ||.| ||| |||.||.||..|.||.
RBAM_016750__ 346 ATGAGCAAATCCGGGCAGA-CAGA---CGG----AGATAAGGCCGTCACC 387
BSNT_02737 445 CAAAGTGAGAGCAAGTACGAAATCCCTAAAGATTCAACGCTGAAA----- 489
|||||||||||||||||.||.||.|||||.|||||..||||||||
RBAM_016750__ 388 CAAAGTGAGAGCAAGTATGAGATTCCTAAGGATTCTGCGCTGAAAAACGA 437
BSNT_02737 490 -GAGAATCAAAATAAC--AGC----TCTGAAAAAGAGACAGACACTAAAA 532
|..|||..||||.|| ||| |||||.|...|||.|||| ||||
RBAM_016750__ 438 CGGCAATACAAATGACGAAGCGCAATCTGACAGCAAGAAAGAC---AAAA 484
BSNT_02737 533 AAGAAACGAAAG----AAAAC-GAAGATAAGAAAAAAGAAAATGACAGTG 577
|.||.||.|||| |.|.| ||||| |||||||||| |||||
RBAM_016750__ 485 AGGACACAAAAGTGTCAGAGCAGAAGA-AAGAAAAAAG-------CAGTG 526
BSNT_02737 578 ATAAGCTGGAGATTAAAGTTGCTGGCACTGAAGGATCG--TTAACGACTT 625
|.|||...|||||.||||..||.||.||.|||||.||| || |..|.|
RBAM_016750__ 527 AAAAGACAGAGATCAAAGCGGCCGGAACGGAAGGCTCGGCTT--CTTCAT 574
BSNT_02737 626 ATGAAGTGTCCGGCGCTGATAA-AATCGAGCTGGAACTGAAGGCATCAGA 674
|..|.||.|||||.||.||||| .|| .||||.|||||||..||.||.||
RBAM_016750__ 575 ACAACGTCTCCGGGGCAGATAAGTAT-AAGCTTGAACTGATTGCTTCTGA 623
BSNT_02737 675 CAGCTCCTGGATTCGAGTGCGCGATGAAAACAGCAGCTCTTTAAAAGAAG 724
||||.|.||||||||.||.||.|||||.|.|.||.|.|||||||||||||
RBAM_016750__ 624 CAGCGCATGGATTCGCGTCCGTGATGACAGCGGCGGTTCTTTAAAAGAAG 673
BSNT_02737 725 GAACGCTGAAAAAAGACGAGACCTATAAAAAAGACATAACTGATCAGAAA 774
||||||||.||||||.|||.||||.||||||||||.|.||.|||||.||.
RBAM_016750__ 674 GAACGCTGCAAAAAGGCGAAACCTTTAAAAAAGACGTCACGGATCAAAAG 723
BSNT_02737 775 CAAGTTGATATCCGCACCGGATATGCACCTAATCTGAAAATAAAAATCAA 824
||..||||.||||||||.||.|||||.|||||.||.|||||.||||||||
RBAM_016750__ 724 CAGATTGAAATCCGCACGGGCTATGCCCCTAACCTTAAAATTAAAATCAA 773
BSNT_02737 825 CGGTAAGGTTCTTTCATATGAACTTGATCCGAAAAAAGTGATGGCACAAA 874
|||..|||||||.||.||||||||..|||||.|..|.||||||||.||.|
RBAM_016750__ 774 CGGAGAGGTTCTGTCCTATGAACTCAATCCGCATGATGTGATGGCGCAGA 823
BSNT_02737 875 CTATAAAGATTGTAAATAAAAAGGAAGAAAAGTCATCTTAA 915
|.||.| .|||.||.|.|||.||| |||
RBAM_016750__ 824 CCATCA-------CAATCAAGATGAAAAAA--------TAA 849
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