Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02735 and RBAM_016730

See DNA alignment / Visit BSNT_02735 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_02735___ymfJ.1.9828.seq
#    -bsequence pep-align/RBAM_016730___ymfJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02735___ymfJ-RBAM_016730___ymfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02735___ymfJ-RBAM_016730___ymfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02735___ymfJ
# 2: RBAM_016730___ymfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 85
# Identity:      76/85 (89.4%)
# Similarity:    81/85 (95.3%)
# Gaps:           0/85 ( 0.0%)
# Score: 400.0
# 
#
#=======================================

BSNT_02735___      1 MSVLENWDSWKNFLGDRLNYAQDKGMSQDTITDLATEIGSYLANEVESKN     50
                     ||||||||:|||||||||||||:||||.:||||||||||.||||||:|||
RBAM_016730__      1 MSVLENWDNWKNFLGDRLNYAQEKGMSDETITDLATEIGGYLANEVDSKN     50

BSNT_02735___     51 EQEKVLADLWSVASKDEQHAIANMMVKLVENNSTH     85
                     .|||||||||||||:|||.||||||||||||||||
RBAM_016730__     51 HQEKVLADLWSVASEDEQRAIANMMVKLVENNSTH     85


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