Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02734 and RBAM_016720

See DNA alignment / Visit BSNT_02734 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_02734___ymfI.1.9828.seq
#    -bsequence pep-align/RBAM_016720___fabG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02734___ymfI-RBAM_016720___fabG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02734___ymfI-RBAM_016720___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02734___ymfI
# 2: RBAM_016720___fabG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     174/242 (71.9%)
# Similarity:   211/242 (87.2%)
# Gaps:           0/242 ( 0.0%)
# Score: 936.0
# 
#
#=======================================

BSNT_02734___      1 MNKTALITGASGGIGKSISETLAARGYNLLLHYNTNQNAAAELAEKLSQM     50
                     |.:|||:||||||||:||||.||..||::||||::|:.||..|||:||..
RBAM_016720__      1 MKQTALVTGASGGIGQSISEALAKNGYDVLLHYHSNKEAAHRLAERLSAS     50

BSNT_02734___     51 FGVNAEILQADLSAQDGADKLTSSIVQPIDAIVLNSGRSHFGLITDVDNA    100
                     |||.|.::|||||:.|||:.|:.|:.||:||::||||:|||||:|||.:.
RBAM_016720__     51 FGVKASVIQADLSSPDGAETLSRSVKQPVDALILNSGKSHFGLVTDVTDD    100

BSNT_02734___    101 TVQEMVQLHVASPYMLTRNLLPGMIRNKSGAIVAVSSIWGETGASCEVLY    150
                     |.:|||||||.||::|.|||:|||||.|||.|||:.|:||||||||||||
RBAM_016720__    101 TAREMVQLHVTSPFLLARNLMPGMIRKKSGGIVAIGSVWGETGASCEVLY    150

BSNT_02734___    151 SMAKGAQHSFVKGLAKELAPSGIRVNAVAPGAVDTNMMNQFTPAEKEEIA    200
                     ||.|||||||||.|||||||||:|||||:||||||||::|||..|||.:|
RBAM_016720__    151 SMVKGAQHSFVKALAKELAPSGVRVNAVSPGAVDTNMLDQFTSDEKEALA    200

BSNT_02734___    201 DEIPIGRLARPQEIADATAFLLSEKASYITGQILSVNGGWHC    242
                     :|||.||||:|:|||:|.|||||:|||||||.||||||||||
RBAM_016720__    201 EEIPAGRLAKPEEIAEAAAFLLSDKASYITGHILSVNGGWHC    242


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