Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02734 and RBAM_016720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02734___ymfI.1.9828.seq
# -bsequence dna-align/RBAM_016720___fabG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02734___ymfI-RBAM_016720___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02734___ymfI-RBAM_016720___fabG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02734___ymfI
# 2: RBAM_016720___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 740
# Identity: 516/740 (69.7%)
# Similarity: 516/740 (69.7%)
# Gaps: 22/740 ( 3.0%)
# Score: 1647.0
#
#
#=======================================
BSNT_02734___ 1 ATGAACAAAACAGCACTAATCACCGGAGCAAGCGGCGGCATTGGCAAAAG 50
|||||..|.|||||.||..|.|||||||||||||||||.||.||..||||
RBAM_016720__ 1 ATGAAACAGACAGCGCTCGTAACCGGAGCAAGCGGCGGAATCGGACAAAG 50
BSNT_02734___ 51 CATCAGCGAAACCCTTGCAGCTAGAGGATACAATCTGCTGCTGCATTACA 100
.||.||.|||.||||.|||...|..|||||..|..|.||..|||||||..
RBAM_016720__ 51 TATAAGTGAAGCCCTCGCAAAAAACGGATATGACGTCCTCTTGCATTATC 100
BSNT_02734___ 101 ATACAAATCAAAATGCGGCAGCGGA-GCTTGCTGAAAAACTAAG----TC 145
||.|.|||.|..|.||.||| |..| ||||||.||||..||.|| ||
RBAM_016720__ 101 ATTCTAATAAGGAAGCCGCA-CACAGGCTTGCGGAAAGGCTGAGCGCATC 149
BSNT_02734___ 146 AGATGTTTGGCGTAAATG-CGGAGATATTACAAGCTGATCTGTCCGCGCA 194
| ||.||||||||.| |...|.|||| ||.||.|||||||||.|.|.
RBAM_016720__ 150 A----TTCGGCGTAAAAGCCTCCGTTATT-CAGGCGGATCTGTCCTCACC 194
BSNT_02734___ 195 AGATGGAGCAGATAAGCTGACAAGTTCAATTGTTCAGCCTATTGATGCGA 244
.|||||.||.||.|..||.|...||||..||...||||||.|.|||||..
RBAM_016720__ 195 GGATGGCGCGGAGACACTCAGCCGTTCCGTTAAGCAGCCTGTGGATGCTC 244
BSNT_02734___ 245 TTGTTTTAAACAGTGGAAGAAGCCATTTTGGGCTGATTACGGATGT---A 291
|..|.||||||||.||.|.|||.|||||.||.|||.|||||||.|| .
RBAM_016720__ 245 TGATATTAAACAGCGGCAAAAGTCATTTCGGCCTGGTTACGGACGTTACG 294
BSNT_02734___ 292 GATAACGCAACAGTCCAGGAAATGGTTCAGCTTCATGTGGCGAGTCCGTA 341
|||.|| ||.|..|.|||.|||||.|||||.|||||..|||||||||.
RBAM_016720__ 295 GATGAC---ACGGCGCGGGAGATGGTGCAGCTGCATGTAACGAGTCCGTT 341
BSNT_02734___ 342 TATGCTGACGAGAAACCTTCTGCCAGGCATGATTCGG-AATAAATCGGGA 390
|.|..||.||.|.||.||..||||.||||||||.||| ||.|||.||||.
RBAM_016720__ 342 TCTTTTGGCGCGTAATCTGATGCCCGGCATGATCCGGAAAAAAAGCGGGG 391
BSNT_02734___ 391 GCGATTGTGGCTGTCAGCTCGATTTGGGGAGAGACTGGAGCATCCTGTGA 440
|| ||.||.||..||.|.||..|.||||||||.||.||.|||||.||.||
RBAM_016720__ 392 GC-ATCGTCGCGATCGGTTCCGTCTGGGGAGAAACAGGCGCATCGTGCGA 440
BSNT_02734___ 441 AGTGCTGTACAGCATGGCAAAAGGAGCTCAGCATTCGTTTGTAAAAG-GA 489
.||..|.||||||||||..||.|||||.|||||||||||.||.|||| |.
RBAM_016720__ 441 GGTATTATACAGCATGGTCAAGGGAGCGCAGCATTCGTTCGTCAAAGCGC 490
BSNT_02734___ 490 TTGGCTAAGGAGCTGGCGCCAAGCGGAATCAGAGTAAACGCCGTAGCGCC 539
|| ||.||.|||||.||.||.|||||..||.|.||.||.||.||..||||
RBAM_016720__ 491 TT-GCCAAAGAGCTTGCTCCGAGCGGCGTCCGCGTGAATGCAGTCTCGCC 539
BSNT_02734___ 540 GGGCGCAGTTGATACAAATATGATGAATCAATTTACCCCGGCTGAAAAAG 589
|||.||.|||||||||||||||.|..||||.||.||..|.|.||||||||
RBAM_016720__ 540 GGGTGCCGTTGATACAAATATGCTTGATCAGTTCACGTCTGATGAAAAAG 589
BSNT_02734___ 590 AAGAGATCGCTGATGAGATTCCGATCGGCCGGCTGGCCCGGCCGCAAGAA 639
|||.|.|.||.||.||.|||||....|||||||||||...||||.|.|||
RBAM_016720__ 590 AAGCGTTGGCAGAGGAAATTCCCGCGGGCCGGCTGGCAAAGCCGGAGGAA 639
BSNT_02734___ 640 ATTGCTGATGCAACAGCTTTTCTCCTGTCTGAAAAAGCGTCATATATCAC 689
||.||.||.||..|.||.|||.|..|.||.||.||.||.||.|||||.||
RBAM_016720__ 640 ATCGCCGAAGCGGCGGCCTTTTTATTATCGGACAAGGCTTCCTATATTAC 689
BSNT_02734___ 690 CGGCCAAATTCTGTCGGTGAATGGCGGCTGGCACTGTTGA 729
.||.||.||..|.||.||.||.||||||||||||||.|||
RBAM_016720__ 690 GGGGCATATATTATCCGTAAACGGCGGCTGGCACTGCTGA 729
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