Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02733 and RBAM_016710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence pep-align/BSNT_02733___ymfH.1.9828.seq
# -bsequence pep-align/RBAM_016710___ymfH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02733___ymfH-RBAM_016710___ymfH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02733___ymfH-RBAM_016710___ymfH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02733___ymfH
# 2: RBAM_016710___ymfH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity: 368/428 (86.0%)
# Similarity: 408/428 (95.3%)
# Gaps: 0/428 ( 0.0%)
# Score: 1972.0
#
#
#=======================================
BSNT_02733___ 1 MIKPIEYEQLQETLYHEKMSNGLDVYVLPKKGFNKTYAVFTTKYGSIDNR 50
|.|||.:||||||||||||:||||||||||:||||||||||||||||||:
RBAM_016710__ 1 MTKPINFEQLQETLYHEKMANGLDVYVLPKQGFNKTYAVFTTKYGSIDNQ 50
BSNT_02733___ 51 FVPLGKNEMVHVPDGIAHFLEHKLFEKADGDVFQDFSKQGASANAFTSFT 100
||||.|.|||||||||||||||||||||||||||||||||||||||||||
RBAM_016710__ 51 FVPLNKEEMVHVPDGIAHFLEHKLFEKADGDVFQDFSKQGASANAFTSFT 100
BSNT_02733___ 101 RTAYLFSSTSNVERNLETLIDFVQDPYFTEKTVEKEKGIIGQEINMYDDN 150
|||||||||||||:|||||:|||||||||||:||||||||||||||||||
RBAM_016710__ 101 RTAYLFSSTSNVEKNLETLVDFVQDPYFTEKSVEKEKGIIGQEINMYDDN 150
BSNT_02733___ 151 PDWRLYFGVIENMYKEHPVRIDIAGTVESISHITKDLLYECYETFYHPSN 200
|||||:||:||||||:|||:||||||||||||||||||||||||||||||
RBAM_016710__ 151 PDWRLFFGLIENMYKDHPVKIDIAGTVESISHITKDLLYECYETFYHPSN 200
BSNT_02733___ 201 MLLFIVGPVDPEAIISQVRENQGKKPYTDQPEIKREEVKEQEAVFRKEKE 250
|||||||||||||:|||||:||.|||:|||||||||||:|||||||:|:|
RBAM_016710__ 201 MLLFIVGPVDPEAVISQVRKNQEKKPFTDQPEIKREEVQEQEAVFRREQE 250
BSNT_02733___ 251 IKMNVQGPKCLVGLKSKNPFKLGKELLKHELSMNLLLEALFGKSSAQYES 300
:||||||.|||||||:|:|:|.|:|||||||:|||:||.||||||..|..
RBAM_016710__ 251 LKMNVQGSKCLVGLKAKDPYKTGQELLKHELTMNLMLECLFGKSSPHYGD 300
BSNT_02733___ 301 LYEKGYIDETFSFDFTAEYGFGFAAIGGDTPEPDQLAEDISSMLLRAGEL 350
||:|||||||||||:|||||||||::||||||||:||:::..|||.|...
RBAM_016710__ 301 LYDKGYIDETFSFDYTAEYGFGFASVGGDTPEPDKLADELKHMLLDAESA 350
BSNT_02733___ 351 ITAEKIELARKKKIGTFLKALNSPEYIANQFTRYAFLDMSLFDVVTVLEQ 400
:||||::||||||||:||||||||||||||||||||||||||||||||||
RBAM_016710__ 351 VTAEKLDLARKKKIGSFLKALNSPEYIANQFTRYAFLDMSLFDVVTVLEQ 400
BSNT_02733___ 401 ITLEDVQNVIQEEIAADRLTVCKVVPKS 428
|||:||:.||:|||:.||||||||||||
RBAM_016710__ 401 ITLDDVKRVIKEEISEDRLTVCKVVPKS 428
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