Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00973 and RBAM_016680

See DNA alignment / Visit BSNT_00973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_00973___ydgG.1.9828.seq
#    -bsequence pep-align/RBAM_016680.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00973___ydgG-RBAM_016680.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00973___ydgG-RBAM_016680.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00973___ydgG
# 2: RBAM_016680
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:      37/153 (24.2%)
# Similarity:    72/153 (47.1%)
# Gaps:           3/153 ( 2.0%)
# Score: 129.5
# 
#
#=======================================

BSNT_00973___      1 MNEQKLCQAINLFVEVLLEGTEFVHREINQDVFKHISREQADLLKILKVK     50
                     |:|:|:.|.|..:.:|.|...:.:...|.:.|.|.::.:|..:|:.:.:.
RBAM_016680        1 MHEEKVKQLIQRYSDVYLHVLKKIDSIIAEKVNKELTLDQYYILRYIMLN     50

BSNT_00973___     51 GPTSPGSLAMYQNVHKSAISNRLKKLLEKGLVQWDDCPEKSDRRSKLINI    100
                     .......||...:|:||||::...:|.|||.:  :....:|||||.|:|:
RBAM_016680       51 PDCKSIELAAVCHVNKSAITSMTNRLYEKGYI--NRARSQSDRRSILLNV     98

BSNT_00973___    101 TPSGEHILEELDSAIFNALKPLIDDIDEEHLHSIIEIFTILKSKFKGGDS    150
                     |..|..:...::..|...::..|...||:.....:..:..|.......:.
RBAM_016680       99 TEKGTEVFHRVERRIEELVRSYIMYFDEDEAEMFVNTYEKLYRLMMTEED    148

BSNT_00973___    151 AE-    152
                     .: 
RBAM_016680      149 QQT    151


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