Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02721 and RBAM_016610

See DNA alignment / Visit BSNT_02721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02721___dapA.1.9828.seq
#    -bsequence pep-align/RBAM_016610___dapA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02721___dapA-RBAM_016610___dapA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02721___dapA-RBAM_016610___dapA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02721___dapA
# 2: RBAM_016610___dapA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     267/290 (92.1%)
# Similarity:   279/290 (96.2%)
# Gaps:           1/290 ( 0.3%)
# Score: 1345.0
# 
#
#=======================================

BSNT_02721___      1 MNFGNVSTAMITPFDNKGNVDFQKLSTLIDYLLKNGTDSLVVAGTTGESP     50
                     ||.||:|||||||||:||||||||||||||||||||||||||||||||||
RBAM_016610__      1 MNVGNISTAMITPFDSKGNVDFQKLSTLIDYLLKNGTDSLVVAGTTGESP     50

BSNT_02721___     51 TLSTEEKIALFEYTVKEVNGRVPVIAGTGSNNTKDSIKLTKKAEEAGVDA    100
                     ||||||||||||:||||||||||||||||||||||||||||||||||||.
RBAM_016610__     51 TLSTEEKIALFEFTVKEVNGRVPVIAGTGSNNTKDSIKLTKKAEEAGVDC    100

BSNT_02721___    101 VMLVTPYYNKPSQEGMYQHFKAIAAETSLPVILYNVPGRTVASLAPETTI    150
                     |||||||||||||||||:||||||.||||||:||||||||||||||||.|
RBAM_016610__    101 VMLVTPYYNKPSQEGMYRHFKAIAEETSLPVMLYNVPGRTVASLAPETAI    150

BSNT_02721___    151 RLAADIPNVVAIKEASGDLEAITKIIAETPEDFYVYSGDDALTLPILSVG    200
                     || |:|||:.|||||||||:||||||||||||||||||||.||||||:||
RBAM_016610__    151 RL-AEIPNISAIKEASGDLDAITKIIAETPEDFYVYSGDDGLTLPILAVG    199

BSNT_02721___    201 GRGVVSVASHIAGTDMQQMIKNYTNGQTANAALIHQKLLPIMKELFKAPN    250
                     |||||||||||.|:|||||||||||||||.||||||||||||||||||||
RBAM_016610__    200 GRGVVSVASHIVGSDMQQMIKNYTNGQTATAALIHQKLLPIMKELFKAPN    249

BSNT_02721___    251 PAPVKTALQLRGLDVGSVRLPLVPLTEDERLSLSSTISEL    290
                     ||||||||||:|||||||||||:||.|||||||||.||||
RBAM_016610__    250 PAPVKTALQLKGLDVGSVRLPLIPLNEDERLSLSSVISEL    289


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