Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02721 and RBAM_016610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02721___dapA.1.9828.seq
# -bsequence dna-align/RBAM_016610___dapA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02721___dapA-RBAM_016610___dapA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02721___dapA-RBAM_016610___dapA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02721___dapA
# 2: RBAM_016610___dapA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 874
# Identity: 729/874 (83.4%)
# Similarity: 729/874 (83.4%)
# Gaps: 5/874 ( 0.6%)
# Score: 3054.0
#
#
#=======================================
BSNT_02721___ 1 ATGAATTTCGGAAATGTGTCTACAGCGATGATTACACCCTTTGACAATAA 50
||||||.||||||||.|.|||||||||||||||||.||||||||||.|||
RBAM_016610__ 1 ATGAATGTCGGAAATATATCTACAGCGATGATTACCCCCTTTGACAGTAA 50
BSNT_02721___ 51 AGGGAACGTAGACTTTCAAAAACTGTCTACACTGATTGATTACTTGTTGA 100
||||||.||||||||||||||||||||||||.|.||.||.||.|||||||
RBAM_016610__ 51 AGGGAATGTAGACTTTCAAAAACTGTCTACATTAATCGACTATTTGTTGA 100
BSNT_02721___ 101 AAAACGGAACGGATTCTTTAGTAGTAGCGGGAACAACTGGAGAATCTCCG 150
|||||||.||||||||||||||.||.||.||.||.||.||.|||||||||
RBAM_016610__ 101 AAAACGGCACGGATTCTTTAGTCGTCGCAGGCACGACCGGCGAATCTCCG 150
BSNT_02721___ 151 ACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACAGTAAAAGA 200
||.||||||||.||||||||||||||.||.|||||||.||||||.|||||
RBAM_016610__ 151 ACACTTTCAACGGAAGAAAAAATTGCACTCTTTGAATTTACAGTCAAAGA 200
BSNT_02721___ 201 AGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGAAGCAACAACACGA 250
|||.||||||||.|||||.|||||.||.|||||.|||||||||||.||||
RBAM_016610__ 201 AGTGAACGGACGCGTGCCTGTTATTGCGGGTACGGGAAGCAACAATACGA 250
BSNT_02721___ 251 AAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGA-CGC 299
||||.||||||||.|||||||||||||||||.|||||.|||||.|| .||
RBAM_016610__ 251 AAGACTCCATTAAACTGACAAAAAAAGCTGAAGAAGCCGGCGTCGATTGC 300
BSNT_02721___ 300 TGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGT 349
|||||||||||.||.||||||||.|||||.|||||.|||||.||.||||
RBAM_016610__ 301 -GTTATGCTTGTCACGCCGTATTATAATAAGCCTTCCCAAGAGGGGATGT 349
BSNT_02721___ 350 ACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTCCGGTTATTCTC 399
|||..|||||||||||.|||||||.|||.||.||||||||.||.||.||.
RBAM_016610__ 350 ACCGTCATTTTAAAGCCATTGCGGAAGAAACGTCTCTTCCTGTGATGCTT 399
BSNT_02721___ 400 TATAATGTTCCTGGCCGTACGGTTGCTTCTCTTGCTCCTGAAACGACGAT 449
||.||.||.||.|||.|.|||||.|||||.|||||.||.||||||.|.||
RBAM_016610__ 400 TACAACGTGCCGGGCAGAACGGTCGCTTCGCTTGCGCCGGAAACGGCCAT 449
BSNT_02721___ 450 CCGTTTGGCGGCAGACATTCCGAATGTGGTTGCGATTAAAGAAGCGAGCG 499
|.|..|.||| ||.||.||||||.|...||||||||||||||||||||
RBAM_016610__ 450 CAGACTTGCG---GAGATACCGAATATCTCTGCGATTAAAGAAGCGAGCG 496
BSNT_02721___ 500 GAGACCTCGAAGCGATTACAAAAATTATTGCTGAAACACCTGAAGACTTC 549
|.||.||.||.||.|||||.|||||.|||||.||||||||.|||||.||.
RBAM_016610__ 497 GCGATCTTGATGCCATTACGAAAATCATTGCCGAAACACCGGAAGATTTT 546
BSNT_02721___ 550 TATGTCTATTCAGGGGATGATGCTCTGACGCTTCCAATTCTTTCAGTTGG 599
||.|||||||||||.|||||.|...|.||||||||.|||||..||||.||
RBAM_016610__ 547 TACGTCTATTCAGGTGATGACGGGTTAACGCTTCCTATTCTCGCAGTCGG 596
BSNT_02721___ 600 AGGAAGAGGAGTTGTGTCAGTGGCGAGCCATATTGCAGGCACTGATATGC 649
.|||||||||||.|||||||||||.||||||||.|.|||..||||.||||
RBAM_016610__ 597 CGGAAGAGGAGTCGTGTCAGTGGCCAGCCATATCGTAGGTTCTGACATGC 646
BSNT_02721___ 650 AGCAAATGATCAAAAATTATACGAATGGGCAAACAGCTAATGCGGCACTG 699
||||.|||||.|||||.||||||||.|||||.||.||.|..|||||||||
RBAM_016610__ 647 AGCAGATGATTAAAAACTATACGAACGGGCAGACGGCAACCGCGGCACTG 696
BSNT_02721___ 700 ATTCATCAGAAACTGCTGCCGATTATGAAGGAACTGTTTAAAGCGCCTAA 749
|||||||||||.||.||||||||.||||||||.||.||||||||||||||
RBAM_016610__ 697 ATTCATCAGAAGCTTCTGCCGATCATGAAGGAGCTCTTTAAAGCGCCTAA 746
BSNT_02721___ 750 TCCTGCTCCAGTCAAAACAGCGCTTCAGCTGAGAGGTCTTGATGTCGGTT 799
|||.|||||.||||||||.|||||.|||||||.|||.|||||||||||.|
RBAM_016610__ 747 TCCGGCTCCGGTCAAAACGGCGCTACAGCTGAAAGGCCTTGATGTCGGAT 796
BSNT_02721___ 800 CTGTGCGTCTGCCTCTAGTCCCGTTAACTGAGGATGAACGTCTGAGCTTA 849
||||||||||.|||||..|||||.|.|.|||.|||||||||||||||.|.
RBAM_016610__ 797 CTGTGCGTCTTCCTCTTATCCCGCTGAATGAAGATGAACGTCTGAGCCTG 846
BSNT_02721___ 850 AGCAGCACGATCAGCGAACTGTAA 873
||||||...|||||||||||||||
RBAM_016610__ 847 AGCAGCGTCATCAGCGAACTGTAA 870
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