Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02718 and RBAM_016590

See DNA alignment / Visit BSNT_02718 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02718___asd.1.9828.seq
#    -bsequence pep-align/RBAM_016590___asd.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02718___asd-RBAM_016590___asd.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02718___asd-RBAM_016590___asd.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02718___asd
# 2: RBAM_016590___asd
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity:     319/346 (92.2%)
# Similarity:   334/346 (96.5%)
# Gaps:           0/346 ( 0.0%)
# Score: 1639.0
# 
#
#=======================================

BSNT_02718___      1 MGRGLHVAVVGATGAVGQQMLKTLEDRNFEMDTLTLLSSKRSAGTKVTFK     50
                     ||||||||||||||||||||||||||||||::||||||||||||||||||
RBAM_016590__      1 MGRGLHVAVVGATGAVGQQMLKTLEDRNFEIETLTLLSSKRSAGTKVTFK     50

BSNT_02718___     51 GQELTVQEASPESFEGVNIALFSAGGSVSQALAPEAVKRGAIVIDNTSAF    100
                     |:|.|||||.|||||||:||||||||||||:|||||||||||||||||||
RBAM_016590__     51 GEEYTVQEAVPESFEGVHIALFSAGGSVSQSLAPEAVKRGAIVIDNTSAF    100

BSNT_02718___    101 RMDENTPLVVPEVNEADLHEHNGIIANPNCSTIQMVAALEPIRKAYGLNK    150
                     |||||||||||||||.|||:||||||||||||||||||||||||||||.|
RBAM_016590__    101 RMDENTPLVVPEVNEGDLHKHNGIIANPNCSTIQMVAALEPIRKAYGLKK    150

BSNT_02718___    151 VIVSTYQAVSGAGNEAVKELYSQTQAILNKEEIEPEIMPVKGDKKHYQIA    200
                     ||||||||||||||||.|||||||:||||.|..||.||||||||||||||
RBAM_016590__    151 VIVSTYQAVSGAGNEAAKELYSQTKAILNNEPAEPSIMPVKGDKKHYQIA    200

BSNT_02718___    201 FNAIPQIDKFQDNGYTFEEMKMINETKKIMHMPDLQVAATCVRLPIQTGH    250
                     |||||||||||||||||||||||||||||||||:|:||||||||||:|||
RBAM_016590__    201 FNAIPQIDKFQDNGYTFEEMKMINETKKIMHMPNLEVAATCVRLPIETGH    250

BSNT_02718___    251 SESVYIEVDRDDATVEDIKNLLKEAPGVTLQDDPSQQLYPMPADAVGKND    300
                     |||||||:|||||||||:|.||||||||||||||::||||||||.|||.|
RBAM_016590__    251 SESVYIELDRDDATVEDMKQLLKEAPGVTLQDDPAEQLYPMPADCVGKRD    300

BSNT_02718___    301 VFVGRIRKDLDRANGFHLWVVSDNLLKGAAWNSVQIAESLKKLNLV    346
                     ||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_016590__    301 VFVGRIRKDLDRANGFHLWVVSDNLLKGAAWNSVQIAESLQKLNLV    346


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.