Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02718 and RBAM_016590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02718___asd.1.9828.seq
# -bsequence dna-align/RBAM_016590___asd.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02718___asd-RBAM_016590___asd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02718___asd-RBAM_016590___asd.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02718___asd
# 2: RBAM_016590___asd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1045
# Identity: 865/1045 (82.8%)
# Similarity: 865/1045 (82.8%)
# Gaps: 8/1045 ( 0.8%)
# Score: 3576.0
#
#
#=======================================
BSNT_02718___ 1 ATGGGAAGAGGTTTACACGTAGCTGTTGTCGGAGCGACAGGGGCTGTGGG 50
|||||||||||.|||||||||||.||||||||||||||.||.||.||.||
RBAM_016590__ 1 ATGGGAAGAGGATTACACGTAGCAGTTGTCGGAGCGACGGGAGCCGTAGG 50
BSNT_02718___ 51 ACAACAAATGCTTAAAACACTTGAAGACAGAAACTTTGAAATGGACACAC 100
|||.||||||||.||||||||.||||||||||||||||||||.||.||||
RBAM_016590__ 51 ACAGCAAATGCTGAAAACACTGGAAGACAGAAACTTTGAAATCGAAACAC 100
BSNT_02718___ 101 TTACATTGCTATCTTCAAAACGCTCTGCGGGGACAAAAGTCACGTTTAAA 150
|.|||.|.|||||.|||||.||.|||||.||.||.|||||.|||||||||
RBAM_016590__ 101 TCACACTACTATCCTCAAAGCGTTCTGCTGGTACGAAAGTAACGTTTAAA 150
BSNT_02718___ 151 GGCCAAGAACTGACTGTTCAGGAAGCTTCTCCTGAGAGCTTTGAAGGGGT 200
|||.|||||...||.||.|||||||||..||||||.|||||.|||||.||
RBAM_016590__ 151 GGCGAAGAATATACAGTGCAGGAAGCTGTTCCTGAAAGCTTCGAAGGCGT 200
BSNT_02718___ 201 AAATATTGCTTTGTTCAGCGCCGGCGGAAGCGTATCAC-AAGCATTGGCA 249
..||||.||.||.||||||||||||||||||||||||| |||| |||||.
RBAM_016590__ 201 TCATATCGCGTTATTCAGCGCCGGCGGAAGCGTATCACAAAGC-TTGGCG 249
BSNT_02718___ 250 CCAGAAGCTGTAAAACGCGGCGCTATTGTTATAGATAATACGAGCGCGTT 299
||.||.|||||||||||.||.||.||.||.||.||.|||||.|||||.||
RBAM_016590__ 250 CCTGAGGCTGTAAAACGGGGAGCCATCGTGATTGACAATACCAGCGCATT 299
BSNT_02718___ 300 CCGCATGGATGAAAATACACCGCTTGTTGTGCCAGAAGTGAATGAGGCAG 349
|||.|||||.||||||||||||||.||.|||||.||.|||||.||.|..|
RBAM_016590__ 300 CCGTATGGACGAAAATACACCGCTCGTGGTGCCTGAGGTGAACGAAGGTG 349
BSNT_02718___ 350 ACTTGCATGAACACAACGGCATTATTGCCAATCCAAACTGCTCTACAATC 399
|..||||..||||.|||||||||||.|||||.||.|||||.||.||.||.
RBAM_016590__ 350 ATCTGCACAAACATAACGGCATTATCGCCAACCCTAACTGTTCAACGATT 399
BSNT_02718___ 400 CAAATGGTTGCGGCACTTGAACCGATCCGCAAAGCATATGGCTTAAACAA 449
||.|||||.||.||.||||||||||||||||||||.||.||.||.||.||
RBAM_016590__ 400 CAGATGGTGGCTGCGCTTGAACCGATCCGCAAAGCGTACGGATTGAAAAA 449
BSNT_02718___ 450 GGTCATCGTATCAACTTACCAGGCAGTATCAGGAGCGGGTAATGAAGCTG 499
.|||||.|||||.||||||||.||.||.||.||.||.||.||||||||.|
RBAM_016590__ 450 AGTCATTGTATCTACTTACCAAGCTGTGTCCGGGGCCGGCAATGAAGCGG 499
BSNT_02718___ 500 TAAAAGAGCTTTACAGCCAAACACAGGCGATTTTAAATAAAGAAGAAATA 549
..||.||..|.||||||||.|||.|||||||||||||.||.|||.....|
RBAM_016590__ 500 CGAAGGAATTGTACAGCCAGACAAAGGCGATTTTAAACAATGAACCCGCA 549
BSNT_02718___ 550 GAGCCTGAGATCATGCCTGTAAAAGGTGACAAAAAACACTATCAAATCGC 599
||.||....||.|||||.||.|||||.||||||||.||.|||||||||||
RBAM_016590__ 550 GAACCGTCCATTATGCCGGTTAAAGGCGACAAAAAGCATTATCAAATCGC 599
BSNT_02718___ 600 CTTCAACGCGATTCCGCAAATCGATAAATTCCAAGATAACGGCTATACGT 649
.||.|||||.|||||||||||.||||||||||||||||||||||||||||
RBAM_016590__ 600 ATTTAACGCCATTCCGCAAATTGATAAATTCCAAGATAACGGCTATACGT 649
BSNT_02718___ 650 TTGAGGAAATGAAAATGATAAATGAAACGAAAAAAATCATGCACATGCCT 699
|||||||||||||||||||.|||||||||||||||||||||||.|||||.
RBAM_016590__ 650 TTGAGGAAATGAAAATGATTAATGAAACGAAAAAAATCATGCATATGCCG 699
BSNT_02718___ 700 GACCTTCAAGTTGCGGCTACATGTGTGAGACTGCCAATCCAAACTGGGCA 749
.|.||..||||.||.||.||||||||.||||||||.||..||||.|||||
RBAM_016590__ 700 AATCTGGAAGTGGCTGCGACATGTGTCAGACTGCCGATTGAAACAGGGCA 749
BSNT_02718___ 750 CTCAGAGTCCGTCTACATTGAGGTAGACCGTGATGACGCTACAGTTGAAG 799
||||||.||.||.|||||||||.|.||||||||||||||.||.|||||||
RBAM_016590__ 750 CTCAGAATCTGTTTACATTGAGCTTGACCGTGATGACGCAACCGTTGAAG 799
BSNT_02718___ 800 ATATTAAAAATCTATTGAAAGAAGCTCCGGGCGTGACACTTCAGGATGAT 849
||||.|||.|.||.||.||||||||||||||.||.||.||||||||||||
RBAM_016590__ 800 ATATGAAACAGCTTTTAAAAGAAGCTCCGGGTGTTACGCTTCAGGATGAT 849
BSNT_02718___ 850 CCAAGCC--AGCAGCTTTATCCGATGCCTGCTGA-TGCTGTCGGCAAAAA 896
|| |.| ||||||||||.|||||||||||||| ||| |||||||||..
RBAM_016590__ 850 CC--GGCGGAGCAGCTTTACCCGATGCCTGCTGATTGC-GTCGGCAAACG 896
BSNT_02718___ 897 CGATGTGTTTGTGGGCCGCATCCGCAAAGACTTGGACAGAGCAAACGGTT 946
||||||.|||||.||..|.|||||.|||||.|||||||||||||||||||
RBAM_016590__ 897 CGATGTATTTGTAGGAAGAATCCGGAAAGATTTGGACAGAGCAAACGGTT 946
BSNT_02718___ 947 TTCATTTATGGGTTGTTTCTGATAACCTATTAAAAGGCGCGGCATGGAAC 996
|||||||.||||||||||||||||||||.|||||||||||.||.||||||
RBAM_016590__ 947 TTCATTTGTGGGTTGTTTCTGATAACCTGTTAAAAGGCGCCGCTTGGAAC 996
BSNT_02718___ 997 TCTGTTCAAATTGCAGAAAGCCTGAAAAAACTAAACCTCGTATAA 1041
||.||.|||||.||.|||||||||.|||||||.||||||||||||
RBAM_016590__ 997 TCAGTCCAAATCGCGGAAAGCCTGCAAAAACTGAACCTCGTATAA 1041
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