Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02715 and RBAM_016570

See DNA alignment / Visit BSNT_02715 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02715___spoVFA.1.9828.seq
#    -bsequence pep-align/RBAM_016570___spoVFA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02715___spoVFA-RBAM_016570___spoVFA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02715___spoVFA-RBAM_016570___spoVFA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02715___spoVFA
# 2: RBAM_016570___spoVFA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     258/297 (86.9%)
# Similarity:   277/297 (93.3%)
# Gaps:           1/297 ( 0.3%)
# Score: 1303.0
# 
#
#=======================================

BSNT_02715___      1 MLTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNI     50
                     |||||.||:|||||||||||||||||.|||||.||||||.||||.|||.|
RBAM_016570__      1 MLTGLTIAIIGGDARQLEIIRKLTEQHADIYLAGFDQLDDGFTGTVKCKI     50

BSNT_02715___     51 DEIPFQQIDSIILPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF    100
                     ||||||:||||||||||||||||||||||||||||||.:|:|||.||||:
RBAM_016570__     51 DEIPFQKIDSIILPVSATTGEGVVSTVFSNEEVVLKQSYLERTPEHCVIY    100

BSNT_02715___    101 SGISNVYLENIAAQAKRKLVKLFERDDIAIYNSIPTVEGTIMLAIQHTDY    150
                     |||||.|||.||::|.||||||||||||||:|||||||||||:|||||||
RBAM_016570__    101 SGISNAYLEGIASEAGRKLVKLFERDDIAIFNSIPTVEGTIMMAIQHTDY    150

BSNT_02715___    151 TIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVP    200
                     |||||.|||||:||||||||||||||||.|||||||||||||||||||.|
RBAM_016570__    151 TIHGSNVAVLGMGRTGMTIARTFAALGAKVKVGARSSAHLARITEMGLFP    200

BSNT_02715___    201 FHTDELKEHVKDIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTD    250
                     |..:||.|||.||||||||:||:||||:|||.||||||||||||||||||
RBAM_016570__    201 FQLEELTEHVNDIDICINTVPSLILNQSVLSRMTPKTLILDLASRPGGTD    250

BSNT_02715___    251 FKYAEKQGIKALLAPGLPGIVAPKTAGQILANVLSKLLAEIQAEEGK    297
                     |||||||||||||||||||||||||||||:|||||||||::: :|||
RBAM_016570__    251 FKYAEKQGIKALLAPGLPGIVAPKTAGQIIANVLSKLLADLK-KEGK    296


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