Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02715 and RBAM_016570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02715___spoVFA.1.9828.seq
# -bsequence dna-align/RBAM_016570___spoVFA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02715___spoVFA-RBAM_016570___spoVFA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02715___spoVFA-RBAM_016570___spoVFA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02715___spoVFA
# 2: RBAM_016570___spoVFA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 899
# Identity: 711/899 (79.1%)
# Similarity: 711/899 (79.1%)
# Gaps: 13/899 ( 1.4%)
# Score: 2782.0
#
#
#=======================================
BSNT_02715___ 1 ATGTTAACCGGATTGAAAATTGCAGTTATCGGCGGTGACGCAAGACAGCT 50
||||||||||||||||.||||||..|.||.||||||||||||||||||||
RBAM_016570__ 1 ATGTTAACCGGATTGACAATTGCGATCATTGGCGGTGACGCAAGACAGCT 50
BSNT_02715___ 51 CGAAATTATAAGAAAGCTCACTGAACAGCAGGCTGACATCTATCTTGTCG 100
.||.||||||||||||||.||.||||||||.||.||.||.|||||||..|
RBAM_016570__ 51 TGAGATTATAAGAAAGCTGACAGAACAGCATGCCGATATTTATCTTGCAG 100
BSNT_02715___ 101 GTTTTGACCAATTGGATCACGGTTTTACCGGGGCAGTAAAATGCAATATT 150
|.|||||||||||||||.||||||||||.||..|.||.||||||||.|||
RBAM_016570__ 101 GGTTTGACCAATTGGATGACGGTTTTACAGGAACCGTCAAATGCAAAATT 150
BSNT_02715___ 151 GATGAAATTCCTTTTCAGCAAATAGACAGCATCATTCTTCCAGTATCCGC 200
|||||.|||||.|||||..||||||||||.|||||.||.||.|||||.||
RBAM_016570__ 151 GATGAGATTCCCTTTCAAAAAATAGACAGTATCATCCTGCCCGTATCGGC 200
BSNT_02715___ 201 GACAACAGGAGAAGGTGTCGTATCAACTGTATTTTCTAATGAAGAAGTTG 250
.||.||.||||||||.||.||.||.||.||.|||||.|||||||||||.|
RBAM_016570__ 201 AACGACCGGAGAAGGCGTTGTTTCCACGGTTTTTTCAAATGAAGAAGTGG 250
BSNT_02715___ 251 TGTTAAAACAGGACCATCTCGACAGAACGCCTGCACATTGTGTCATTTTC 300
|.|||||.|||..|.||||.||..|.||.||.|..|||||.|||||||..
RBAM_016570__ 251 TATTAAAGCAGAGCTATCTTGAGCGGACACCGGAGCATTGCGTCATTTAT 300
BSNT_02715___ 301 TCAGGCATTTCTAACGTCTATTTAGAAAACATTG-CAGC---TCAGGCAA 346
||||||||.||.||||..|||.|.||....||.| |||| .|.|||
RBAM_016570__ 301 TCAGGCATCTCCAACGCGTATCTTGAGGGGATCGCCAGCGAAGCCGGC-- 348
BSNT_02715___ 347 AAAGAAAACTTGTTAAACTGTTTGAGCGGGATGACATTGCGATATACAAC 396
.|.||||||||.|||.|.|||||.|||||.||.||.|||||||.||||
RBAM_016570__ 349 --CGCAAACTTGTGAAATTATTTGAACGGGACGATATCGCGATATTCAAC 396
BSNT_02715___ 397 TCTATTCCGACTGTAGAAGGAACGATCATGCTGGCTATTCAGCACACGGA 446
||.|||||.|||||.||||||||.||||||.||||.||||||||.|||||
RBAM_016570__ 397 TCGATTCCCACTGTTGAAGGAACAATCATGATGGCGATTCAGCATACGGA 446
BSNT_02715___ 447 TTATACGATACACGGATCACAGGTGGCCGTTCTCGGTCTGGGGCGCACCG 496
||||||.||.|||||||||.|.||.|||||||||||..||||||||||||
RBAM_016570__ 447 TTATACCATTCACGGATCAAATGTCGCCGTTCTCGGCATGGGGCGCACCG 496
BSNT_02715___ 497 GGATGACGATTGCCCGTACATTTGCCGCGCTCGGGGCGAATGTAAAAGTG 546
|.||||||||.|||||.||.|||||.|||.|.||.|||||.|||||||||
RBAM_016570__ 497 GTATGACGATCGCCCGGACGTTTGCGGCGTTAGGAGCGAAGGTAAAAGTG 546
BSNT_02715___ 547 GGGGCAAGAAGTTCAGCGCATCTGGCACGTATCACTGAAATGGGGCTCGT 596
||.||..|.|||||.||.|||.||||.|||||.||.|||||||||||..|
RBAM_016570__ 547 GGCGCGCGGAGTTCGGCTCATTTGGCCCGTATAACGGAAATGGGGCTTTT 596
BSNT_02715___ 597 TCCTTTTCATAC-CGATGAGCTGAAAGAGCATGTAAAAGATATAGATATT 645
||||||||| || .||.|||||.|..||.||||||||.|||||.|||||.
RBAM_016570__ 597 TCCTTTTCA-ACTTGAAGAGCTTACTGAACATGTAAATGATATTGATATC 645
BSNT_02715___ 646 TGCATTAATACCATACCGAGTATGATTTTAAATCAAACGGTACTTTCTAG 695
||||||||.|||.|||||||..|||||.|.|||||||..||..|.||..|
RBAM_016570__ 646 TGCATTAACACCGTACCGAGCTTGATTCTGAATCAAAGCGTTTTATCGCG 695
BSNT_02715___ 696 CATGACACCAAAAACCTTAATATTGGATCTGGCCTCACGTCCCGGGGGAA 745
||||||.||.||.|||||.||.||||||.|.||.||.|||||.||.||||
RBAM_016570__ 696 CATGACGCCGAAGACCTTGATTTTGGATTTAGCATCCCGTCCGGGCGGAA 745
BSNT_02715___ 746 CGGATTTTAAATATGCCGAGAAACAAGGGATTAAAGCACTTCTTGCTCCC 795
|||||||.||||||||.||.||||||||.||||||||.||.||||||||.
RBAM_016570__ 746 CGGATTTCAAATATGCTGAAAAACAAGGCATTAAAGCGCTGCTTGCTCCG 795
BSNT_02715___ 796 GGGCTTCCAGGGATTGTCGCTCCTAAAACAGCTGGGCAAATCCTTGCAAA 845
||.|||||.||.|||||.||.||.||||||||.||.||.||..||||.||
RBAM_016570__ 796 GGTCTTCCGGGAATTGTGGCCCCGAAAACAGCCGGACAGATTATTGCGAA 845
BSNT_02715___ 846 CGTCTTGAGCAAGCTTTTGGCTGAAATACAAGCTGAGGAGGGGAAATAA 894
|||.|||||||||||||||||.||..|| ||| .|.||||||||||||
RBAM_016570__ 846 CGTATTGAGCAAGCTTTTGGCAGACTTA-AAG--AAAGAGGGGAAATAA 891
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