Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02709 and RBAM_016530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence pep-align/BSNT_02709___pnpA.1.9828.seq
# -bsequence pep-align/RBAM_016530___pnpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02709___pnpA-RBAM_016530___pnpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02709___pnpA-RBAM_016530___pnpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02709___pnpA
# 2: RBAM_016530___pnpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 707
# Identity: 675/707 (95.5%)
# Similarity: 694/707 (98.2%)
# Gaps: 2/707 ( 0.3%)
# Score: 3389.0
#
#
#=======================================
BSNT_02709___ 1 MGQEKHVFTIDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKE 50
|||||||||||||||.||||.||||||||||||:||||||||||||||||
RBAM_016530__ 1 MGQEKHVFTIDWAGRQLTVEAGQLAKQANGAVMVRYGDTAVLSTATASKE 50
BSNT_02709___ 51 PKPLDFFPLTVNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIR 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016530__ 51 PKPLDFFPLTVNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIR 100
BSNT_02709___ 101 PLFADGFRNEVQVISIVMSVDQNCSSEMAAMFGSSLALSVSDIPFEGPIA 150
||||||||||||||||||||||:|||||||||||||||.|||||||||||
RBAM_016530__ 101 PLFADGFRNEVQVISIVMSVDQDCSSEMAAMFGSSLALCVSDIPFEGPIA 150
BSNT_02709___ 151 GVTVGRIDDQFIINPTVDQLEKSDINLVVAGTKDAINMVEAGADEVPEEI 200
||||||||.:|:|||||||||||||||:||||||||||||||||||||||
RBAM_016530__ 151 GVTVGRIDGKFVINPTVDQLEKSDINLIVAGTKDAINMVEAGADEVPEEI 200
BSNT_02709___ 201 MLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDEELNEKVKALA 250
||||||||||||||||||||||||||||||:||:|:||||||:||||:||
RBAM_016530__ 201 MLEAIMFGHEEIKRLIAFQEEIVAAVGKEKTEIELYEIDEELSEKVKSLA 250
BSNT_02709___ 251 EEDLLKAIQVHEKHAREDAINEVKNAVVAKFEDEEHDEDTIKQVKQILSK 300
|.|||.||||||||||||||||||||||||||:|||||||||:|||.|||
RBAM_016530__ 251 EPDLLSAIQVHEKHAREDAINEVKNAVVAKFEEEEHDEDTIKKVKQTLSK 300
BSNT_02709___ 301 LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQ 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016530__ 301 LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQ 350
BSNT_02709___ 351 ALSVCTLGALGDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRR 400
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016530__ 351 ALSVCTLGALGDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRR 400
BSNT_02709___ 401 EIGHGALGERALEPVIPSEKDFPYTVRLVSEVLESNGSTSQASICASTLA 450
|||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_016530__ 401 EIGHGALGERALEPVIPNEKDFPYTVRLVSEVLESNGSTSQASICASTLA 450
BSNT_02709___ 451 MMDAGVPIKAPVAGIAMGLVKSGEHYTVLTDIQGMEDALGDMDFKVAGTE 500
||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_016530__ 451 MMDAGVPIKAPVAGIAMGLVKSGEYYTVLTDIQGMEDALGDMDFKVAGTE 500
BSNT_02709___ 501 KGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLATLSESRKELS 550
|||||||||||||||||||||||||||||||||||||||:||.|||||||
RBAM_016530__ 501 KGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLSTLGESRKELS 550
BSNT_02709___ 551 RYAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS 600
:||||||||.||||||||||||||||||||||:|||||||||||||||||
RBAM_016530__ 551 QYAPKILTMNINPDKIRDVIGPSGKQINKIIEDTGVKIDIEQDGTIFISS 600
BSNT_02709___ 601 TDESGNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLV 650
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_016530__ 601 TDESSNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLV 650
BSNT_02709___ 651 HISELALERVGKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEK 700
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016530__ 651 HISELALERVGKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEK 700
BSNT_02709___ 701 EEQQS-- 705
|::|.
RBAM_016530__ 701 EQEQQQS 707
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