Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02708 and RBAM_016510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence pep-align/BSNT_02708___ribC.1.9828.seq
# -bsequence pep-align/RBAM_016510___ribC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02708___ribC-RBAM_016510___ribC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02708___ribC-RBAM_016510___ribC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02708___ribC
# 2: RBAM_016510___ribC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity: 260/316 (82.3%)
# Similarity: 289/316 (91.5%)
# Gaps: 3/316 ( 0.9%)
# Score: 1399.0
#
#
#=======================================
BSNT_02708___ 1 MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVICTAKQIAEEKGL 50
||||||:|||||.||||..|||||||||||||||:|||.||:||||||||
RBAM_016510__ 1 MKTIHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGL 50
BSNT_02708___ 51 TLAVMTFHPHPSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNE 100
:|||||||||||||||||||||||||||||||:||.:||.:|||||||:|
RBAM_016510__ 51 SLAVMTFHPHPSHVLGRDKEPKDLITPLEDKISQIGRLGADVLYVVKFDE 100
BSNT_02708___ 101 VFASLSPKQFIDQYIIGLNVQHAVAGFDFTYGKYGKGTMKTMPDDLDGKA 150
.|||||||||.::||:|||.:|||.||||||||||||||:|:||||:|||
RBAM_016510__ 101 AFASLSPKQFAEEYILGLNARHAVGGFDFTYGKYGKGTMETLPDDLNGKA 150
BSNT_02708___ 151 GCTMVEKLTEQDKKISSSYIRTALQNGDVELANVLLGQPYFIKGIVIHGD 200
|||.|||.||||:||||:|||:|||:||||||:.||||||||:|.|||||
RBAM_016510__ 151 GCTTVEKQTEQDRKISSTYIRSALQDGDVELAHTLLGQPYFIRGTVIHGD 200
BSNT_02708___ 201 KRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEVYNGVCNIGYKPTF 250
|||||||||||||||:||||||||||||||||:.||||.|||||||||||
RBAM_016510__ 201 KRGRTIGFPTANVGLHNSYIVPPTGVYAVKAEIKGEVYEGVCNIGYKPTF 250
BSNT_02708___ 251 YEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQI 300
|||||:||||||:||:|.|:|||..:|||||||||||||||||.|||.||
RBAM_016510__ 251 YEKRPDQPSIEVHLFNFQQDVYGEDVKIEWYKRIRSERKFNGIDELTAQI 300
BSNT_02708___ 301 EKDKQEAIRYFSNLRK 316
.|||||.||:||.
RBAM_016510__ 301 GKDKQETIRFFSK--- 313
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