Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02708 and RBAM_016510

See DNA alignment / Visit BSNT_02708 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02708___ribC.1.9828.seq
#    -bsequence pep-align/RBAM_016510___ribC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02708___ribC-RBAM_016510___ribC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02708___ribC-RBAM_016510___ribC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02708___ribC
# 2: RBAM_016510___ribC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     260/316 (82.3%)
# Similarity:   289/316 (91.5%)
# Gaps:           3/316 ( 0.9%)
# Score: 1399.0
# 
#
#=======================================

BSNT_02708___      1 MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVICTAKQIAEEKGL     50
                     ||||||:|||||.||||..|||||||||||||||:|||.||:||||||||
RBAM_016510__      1 MKTIHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGL     50

BSNT_02708___     51 TLAVMTFHPHPSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNE    100
                     :|||||||||||||||||||||||||||||||:||.:||.:|||||||:|
RBAM_016510__     51 SLAVMTFHPHPSHVLGRDKEPKDLITPLEDKISQIGRLGADVLYVVKFDE    100

BSNT_02708___    101 VFASLSPKQFIDQYIIGLNVQHAVAGFDFTYGKYGKGTMKTMPDDLDGKA    150
                     .|||||||||.::||:|||.:|||.||||||||||||||:|:||||:|||
RBAM_016510__    101 AFASLSPKQFAEEYILGLNARHAVGGFDFTYGKYGKGTMETLPDDLNGKA    150

BSNT_02708___    151 GCTMVEKLTEQDKKISSSYIRTALQNGDVELANVLLGQPYFIKGIVIHGD    200
                     |||.|||.||||:||||:|||:|||:||||||:.||||||||:|.|||||
RBAM_016510__    151 GCTTVEKQTEQDRKISSTYIRSALQDGDVELAHTLLGQPYFIRGTVIHGD    200

BSNT_02708___    201 KRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEVYNGVCNIGYKPTF    250
                     |||||||||||||||:||||||||||||||||:.||||.|||||||||||
RBAM_016510__    201 KRGRTIGFPTANVGLHNSYIVPPTGVYAVKAEIKGEVYEGVCNIGYKPTF    250

BSNT_02708___    251 YEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQI    300
                     |||||:||||||:||:|.|:|||..:|||||||||||||||||.|||.||
RBAM_016510__    251 YEKRPDQPSIEVHLFNFQQDVYGEDVKIEWYKRIRSERKFNGIDELTAQI    300

BSNT_02708___    301 EKDKQEAIRYFSNLRK    316
                     .|||||.||:||.   
RBAM_016510__    301 GKDKQETIRFFSK---    313


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