Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02707 and RBAM_016500

See DNA alignment / Visit BSNT_02707 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02707___truB.1.9828.seq
#    -bsequence pep-align/RBAM_016500___truB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02707___truB-RBAM_016500___truB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02707___truB-RBAM_016500___truB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02707___truB
# 2: RBAM_016500___truB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     254/309 (82.2%)
# Similarity:   280/309 (90.6%)
# Gaps:           0/309 ( 0.0%)
# Score: 1339.0
# 
#
#=======================================

BSNT_02707___      1 MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016500__      1 MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICV     50

BSNT_02707___     51 GRATKIVEYLTEKSKTYDAEITLGFSTTTEDQTGETVEIKPVNHDIDKAD    100
                     |||||||||:|:|||||||||||||||:|||||||||.:|||...:.:||
RBAM_016500__     51 GRATKIVEYVTDKSKTYDAEITLGFSTSTEDQTGETVSVKPVKEPLKEAD    100

BSNT_02707___    101 VEKVLNSLKGKQEQIPPMYSAVKVNGKKLYEYARAGIEVERPKRMITIED    150
                     ::.||:.|||.|||:|||||||||||||||||||||||||||||.|||||
RBAM_016500__    101 IKAVLDELKGPQEQVPPMYSAVKVNGKKLYEYARAGIEVERPKRNITIED    150

BSNT_02707___    151 IALTTEIKHHGETASFRFTVTCSKGTYVRTLAVMIGEKLGYPAHMSHLIR    200
                     ||||:.:.::.:|||||||||||||||||||||.||||||||||||||||
RBAM_016500__    151 IALTSPVTYNEDTASFRFTVTCSKGTYVRTLAVTIGEKLGYPAHMSHLIR    200

BSNT_02707___    201 TASGDFSLDECFTFDELEAQAQSGTVEEHTVPIERALNHLPKWIISDTLA    250
                     ||||||||||||||:|||.|...|||.||.|||:|||||||||:||||||
RBAM_016500__    201 TASGDFSLDECFTFEELEQQVSDGTVAEHAVPIDRALNHLPKWVISDTLA    250

BSNT_02707___    251 KKVENGALLETPEQFSEMTSEDRIAVFTESGTCLAIYFPHPAKKGLLKPA    300
                     ||.|||::.:.|.:||.||::.||||.||.|.|:|||.|||:||||||||
RBAM_016500__    251 KKAENGSVFDIPAEFSAMTADARIAVCTEDGECVAIYMPHPSKKGLLKPA    300

BSNT_02707___    301 KVLMQKSEQ    309
                     |||||||||
RBAM_016500__    301 KVLMQKSEQ    309


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