Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02706 and RBAM_016490

See DNA alignment / Visit BSNT_02706 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02706___rbfA.1.9828.seq
#    -bsequence pep-align/RBAM_016490___rbfA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02706___rbfA-RBAM_016490___rbfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02706___rbfA-RBAM_016490___rbfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02706___rbfA
# 2: RBAM_016490___rbfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:     109/115 (94.8%)
# Similarity:   113/115 (98.3%)
# Gaps:           0/115 ( 0.0%)
# Score: 548.0
# 
#
#=======================================

BSNT_02706___      1 MRANRVGEQMKKELGDIISRKLKDPRIGFLTVTDVRVSGDLQIAKVYISV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016490__      1 MRANRVGEQMKKELGDIISRKLKDPRIGFLTVTDVRVSGDLQIAKVYISV     50

BSNT_02706___     51 LGDEKKREEALKGLAKAKGFIRSEIGSRIRLRKTPEIEFEFDESIDYGNR    100
                     ||.|||:|||||||.|||||||||||||||||||||:||||||||:||||
RBAM_016490__     51 LGGEKKKEEALKGLEKAKGFIRSEIGSRIRLRKTPELEFEFDESIEYGNR    100

BSNT_02706___    101 IETLIHELHSEKPSE    115
                     ||||||||||:||||
RBAM_016490__    101 IETLIHELHSDKPSE    115


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