Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02706 and RBAM_016490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_02706___rbfA.1.9828.seq
# -bsequence dna-align/RBAM_016490___rbfA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02706___rbfA-RBAM_016490___rbfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02706___rbfA-RBAM_016490___rbfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02706___rbfA
# 2: RBAM_016490___rbfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 303/352 (86.1%)
# Similarity: 303/352 (86.1%)
# Gaps: 8/352 ( 2.3%)
# Score: 1328.0
#
#
#=======================================
BSNT_02706___ 1 ATGAGAGCAAACCGTGTCGGCGAGCAAATGAAAAAAGAACTCGGTGATAT 50
||||||||||||||||||||||||||.|||||||||||.|||||.|||||
RBAM_016490__ 1 ATGAGAGCAAACCGTGTCGGCGAGCAGATGAAAAAAGAGCTCGGGGATAT 50
BSNT_02706___ 51 TATCAGCCGCAAGCTGAAAGACCCGAGAATTGGTTTTCTGACAGTAACGG 100
|||||||||.||||||||||||||||||||.||.|||||.||.|||||.|
RBAM_016490__ 51 TATCAGCCGAAAGCTGAAAGACCCGAGAATCGGATTTCTCACTGTAACAG 100
BSNT_02706___ 101 ATGTACGTGTATCAGGTGATTTGCAAATTGCAAAGGTGTATATCTCGGTT 150
|.||||||||.|||||||||||.|||||.||.||||||||||||||.|||
RBAM_016490__ 101 ACGTACGTGTTTCAGGTGATTTACAAATAGCGAAGGTGTATATCTCCGTT 150
BSNT_02706___ 151 CTCGGTGACGAGAAAAAACGGGAA----GAAGCGCTGAAAGGGCTGGCAA 196
|||||.|..|||||||| ||| ||.||||||||||||||.|..|
RBAM_016490__ 151 CTCGGCGGAGAGAAAAA----GAAAGAGGAGGCGCTGAAAGGGCTTGAGA 196
BSNT_02706___ 197 AAGCGAAAGGATTTATCCGATCCGAAATCGGCAGCCGCATCAGACTTCGA 246
|||||||||||||||||||.|||||||||||||||||.||||||||.||.
RBAM_016490__ 197 AAGCGAAAGGATTTATCCGTTCCGAAATCGGCAGCCGAATCAGACTCCGC 246
BSNT_02706___ 247 AAAACGCCTGAAATTGAATTTGAGTTCGATGAATCAATCGATTACGGGAA 296
|||||||||||..||||||||||.||.|||||||||||.||.|||||.||
RBAM_016490__ 247 AAAACGCCTGAGCTTGAATTTGAATTTGATGAATCAATTGAGTACGGCAA 296
BSNT_02706___ 297 TCGGATCGAAACACTGATTCACGAATTACATTCAGAGAAACCATCTGAAT 346
.||.||.||||||.|||||||||||.|.||||||||.|||||.|||||||
RBAM_016490__ 297 CCGTATTGAAACATTGATTCACGAACTGCATTCAGATAAACCGTCTGAAT 346
BSNT_02706___ 347 AA 348
||
RBAM_016490__ 347 AA 348
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