Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02705 and RBAM_016480

See DNA alignment / Visit BSNT_02705 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02705___ylxP.1.9828.seq
#    -bsequence pep-align/RBAM_016480___ylxP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02705___ylxP-RBAM_016480___ylxP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02705___ylxP-RBAM_016480___ylxP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02705___ylxP
# 2: RBAM_016480___ylxP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      84/92 (91.3%)
# Similarity:    88/92 (95.7%)
# Gaps:           0/92 ( 0.0%)
# Score: 439.0
# 
#
#=======================================

BSNT_02705___      1 MIGFAECECIIYDAGSLKEKRAVLKRVLTRVQNKFNVSISEIGYQDTWQR     50
                     ||||||||||||||||||||||||||::||||||||||.:||||||||||
RBAM_016480__      1 MIGFAECECIIYDAGSLKEKRAVLKRIITRVQNKFNVSAAEIGYQDTWQR     50

BSNT_02705___     51 TSFGIAAVSSSRVQTEKELQRVLAFIDSFPEIERTITRTEWF     92
                     ||||||.||||.||.|||:|||||||||||||||||||||||
RBAM_016480__     51 TSFGIAVVSSSHVQAEKEIQRVLAFIDSFPEIERTITRTEWF     92


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