Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02705 and RBAM_016480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_02705___ylxP.1.9828.seq
# -bsequence dna-align/RBAM_016480___ylxP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02705___ylxP-RBAM_016480___ylxP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02705___ylxP-RBAM_016480___ylxP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02705___ylxP
# 2: RBAM_016480___ylxP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity: 232/279 (83.2%)
# Similarity: 232/279 (83.2%)
# Gaps: 0/279 ( 0.0%)
# Score: 972.0
#
#
#=======================================
BSNT_02705___ 1 GTGATCGGATTTGCGGAGTGTGAATGCATCATTTATGATGCAGGATCGCT 50
|||||||||||||||||.|||||||||||||||||||||||.|||||..|
RBAM_016480__ 1 GTGATCGGATTTGCGGAATGTGAATGCATCATTTATGATGCGGGATCATT 50
BSNT_02705___ 51 AAAAGAAAAGCGTGCCGTTCTGAAGCGGGTTTTAACCAGGGTTCAAAACA 100
|||.||.||.||.|||||||||||||||.||.||||.||||||||.||.|
RBAM_016480__ 51 AAAGGAGAAACGAGCCGTTCTGAAGCGGATTATAACGAGGGTTCAGAATA 100
BSNT_02705___ 101 AGTTCAATGTTTCGATTTCGGAGATTGGCTATCAGGACACCTGGCAAAGA 150
|||||||.||.|||....|.||.||.||||||||||||||.|||||..|.
RBAM_016480__ 101 AGTTCAACGTGTCGGCCGCAGAAATCGGCTATCAGGACACTTGGCAGCGG 150
BSNT_02705___ 151 ACCAGCTTCGGAATCGCCGCTGTTTCTTCCTCTCGCGTTCAAACAGAAAA 200
|||||||||||||||||||..||.||.|||||||.||||||..|.|||||
RBAM_016480__ 151 ACCAGCTTCGGAATCGCCGTCGTCTCCTCCTCTCACGTTCAGGCGGAAAA 200
BSNT_02705___ 201 AGAACTGCAACGCGTCCTAGCGTTTATCGATTCTTTTCCTGAAATTGAAC 250
.||..|.||.|||||.||.||||||||.||.||.|||||.|||||.||||
RBAM_016480__ 201 GGAGATCCAGCGCGTACTCGCGTTTATTGACTCCTTTCCCGAAATAGAAC 250
BSNT_02705___ 251 GGACGATCACTAGGACAGAGTGGTTTTAA 279
|||||||||||||.|||||||||||||||
RBAM_016480__ 251 GGACGATCACTAGAACAGAGTGGTTTTAA 279
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